Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp25P57080 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp25P57080 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp25P57080 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.42□□□□□ -0.1
Usp25P57080 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp25P57080 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp25P57080 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Usp25P57080 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp25P57080 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.42□□□□□ -0.1
Usp25P57080 Gm16215-201ENSMUST00000161990 637 ntBASIC14.42□□□□□ -0.1
Usp25P57080 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.42□□□□□ -0.1
Usp25P57080 Gm9630-201ENSMUST00000178304 885 ntBASIC14.42□□□□□ -0.1
Usp25P57080 Gm19184-201ENSMUST00000196798 928 ntBASIC14.42□□□□□ -0.1
Usp25P57080 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.42□□□□□ -0.1
Usp25P57080 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp25P57080 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp25P57080 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp25P57080 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp25P57080 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp25P57080 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp25P57080 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp25P57080 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp25P57080 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp25P57080 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp25P57080 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp25P57080 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Usp25P57080 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp25P57080 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp25P57080 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Usp25P57080 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp25P57080 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp25P57080 AC156031.2-201ENSMUST00000213107 3310 ntBASIC14.42□□□□□ -0.1
Usp25P57080 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp25P57080 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp25P57080 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp25P57080 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp25P57080 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.42□□□□□ -0.1
Usp25P57080 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp25P57080 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp25P57080 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp25P57080 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp25P57080 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp25P57080 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp25P57080 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp25P57080 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Usp25P57080 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp25P57080 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp25P57080 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Usp25P57080 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp25P57080 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.41□□□□□ -0.1
Usp25P57080 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.41□□□□□ -0.1
Usp25P57080 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.41□□□□□ -0.1
Usp25P57080 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Usp25P57080 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.41□□□□□ -0.1
Usp25P57080 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp25P57080 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.41□□□□□ -0.1
Usp25P57080 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp25P57080 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp25P57080 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp25P57080 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp25P57080 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp25P57080 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp25P57080 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp25P57080 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp25P57080 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp25P57080 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Usp25P57080 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp25P57080 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Usp25P57080 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp25P57080 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp25P57080 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Usp25P57080 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC14.4□□□□□ -0.1
Usp25P57080 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp25P57080 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp25P57080 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp25P57080 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp25P57080 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp25P57080 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp25P57080 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp25P57080 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.4□□□□□ -0.1
Usp25P57080 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp25P57080 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp25P57080 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp25P57080 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.4□□□□□ -0.1
Usp25P57080 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Usp25P57080 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp25P57080 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.4□□□□□ -0.1
Usp25P57080 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp25P57080 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Usp25P57080 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp25P57080 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp25P57080 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp25P57080 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Usp25P57080 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Usp25P57080 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp25P57080 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp25P57080 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
Usp25P57080 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp25P57080 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp25P57080 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms