Protein–RNA interactions for Protein: P56716

Rp1, Oxygen-regulated protein 1, mousemouse

Predictions only

Length 2,095 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1P56716 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rp1P56716 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rp1P56716 Gm21811-201ENSMUST00000096485 930 ntBASIC12.82□□□□□ -0.36
Rp1P56716 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rp1P56716 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.82□□□□□ -0.36
Rp1P56716 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rp1P56716 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rp1P56716 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.82□□□□□ -0.36
Rp1P56716 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rp1P56716 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rp1P56716 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Rp1P56716 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rp1P56716 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.82□□□□□ -0.36
Rp1P56716 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rp1P56716 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rp1P56716 Gm11667-201ENSMUST00000119828 486 ntBASIC12.82□□□□□ -0.36
Rp1P56716 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.82□□□□□ -0.36
Rp1P56716 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rp1P56716 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.82□□□□□ -0.36
Rp1P56716 Gm24514-201ENSMUST00000174961 285 ntBASIC12.82□□□□□ -0.36
Rp1P56716 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rp1P56716 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Rp1P56716 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rp1P56716 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rp1P56716 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rp1P56716 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rp1P56716 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.82□□□□□ -0.36
Rp1P56716 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rp1P56716 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rp1P56716 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.82□□□□□ -0.36
Rp1P56716 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rp1P56716 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Rp1P56716 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rp1P56716 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.81□□□□□ -0.36
Rp1P56716 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rp1P56716 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Rp1P56716 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rp1P56716 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.81□□□□□ -0.36
Rp1P56716 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rp1P56716 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rp1P56716 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rp1P56716 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.81□□□□□ -0.36
Rp1P56716 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.81□□□□□ -0.36
Rp1P56716 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.81□□□□□ -0.36
Rp1P56716 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rp1P56716 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 Gm12501-201ENSMUST00000119163 529 ntBASIC12.81□□□□□ -0.36
Rp1P56716 Gm15782-201ENSMUST00000121073 445 ntBASIC12.81□□□□□ -0.36
Rp1P56716 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rp1P56716 Gm3332-201ENSMUST00000189337 928 ntBASIC12.81□□□□□ -0.36
Rp1P56716 Mir7686-201ENSMUST00000200604 57 ntBASIC12.81□□□□□ -0.36
Rp1P56716 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.81□□□□□ -0.36
Rp1P56716 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.81□□□□□ -0.36
Rp1P56716 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rp1P56716 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.8□□□□□ -0.36
Rp1P56716 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rp1P56716 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.8□□□□□ -0.36
Rp1P56716 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rp1P56716 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.8□□□□□ -0.36
Rp1P56716 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rp1P56716 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rp1P56716 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rp1P56716 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rp1P56716 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rp1P56716 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.8□□□□□ -0.36
Rp1P56716 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Rp1P56716 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rp1P56716 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.8□□□□□ -0.36
Rp1P56716 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rp1P56716 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms