Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp1P56183 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rrp1P56183 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp1P56183 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp1P56183 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rrp1P56183 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rrp1P56183 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp1P56183 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.37□□□□□ -0.11
Rrp1P56183 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp1P56183 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rrp1P56183 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp1P56183 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp1P56183 Gm43365-201ENSMUST00000196522 2106 ntBASIC14.36□□□□□ -0.11
Rrp1P56183 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp1P56183 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Rrp1P56183 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp1P56183 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rrp1P56183 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp1P56183 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp1P56183 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.36□□□□□ -0.11
Rrp1P56183 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp1P56183 Gm11424-201ENSMUST00000121929 829 ntBASIC14.36□□□□□ -0.11
Rrp1P56183 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Rrp1P56183 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.36□□□□□ -0.11
Rrp1P56183 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp1P56183 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp1P56183 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.36□□□□□ -0.11
Rrp1P56183 Gm2495-201ENSMUST00000191160 466 ntBASIC14.36□□□□□ -0.11
Rrp1P56183 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.36□□□□□ -0.11
Rrp1P56183 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.36□□□□□ -0.11
Rrp1P56183 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp1P56183 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp1P56183 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rrp1P56183 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp1P56183 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp1P56183 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp1P56183 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.36□□□□□ -0.11
Rrp1P56183 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp1P56183 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rrp1P56183 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp1P56183 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp1P56183 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp1P56183 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp1P56183 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp1P56183 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.36□□□□□ -0.11
Rrp1P56183 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp1P56183 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp1P56183 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.36□□□□□ -0.11
Rrp1P56183 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.36□□□□□ -0.11
Rrp1P56183 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rrp1P56183 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Rrp1P56183 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.35□□□□□ -0.11
Rrp1P56183 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp1P56183 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp1P56183 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp1P56183 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Rrp1P56183 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp1P56183 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp1P56183 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp1P56183 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.35□□□□□ -0.11
Rrp1P56183 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp1P56183 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.35□□□□□ -0.11
Rrp1P56183 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rrp1P56183 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp1P56183 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp1P56183 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rrp1P56183 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp1P56183 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Rrp1P56183 Gm14704-201ENSMUST00000120300 874 ntBASIC14.35□□□□□ -0.11
Rrp1P56183 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.35□□□□□ -0.11
Rrp1P56183 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp1P56183 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp1P56183 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.35□□□□□ -0.11
Rrp1P56183 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.35□□□□□ -0.11
Rrp1P56183 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.35□□□□□ -0.11
Rrp1P56183 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rrp1P56183 Gm27390-201ENSMUST00000184516 176 ntBASIC14.35□□□□□ -0.11
Rrp1P56183 Gm37917-201ENSMUST00000194711 392 ntBASIC14.35□□□□□ -0.11
Rrp1P56183 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.35□□□□□ -0.11
Rrp1P56183 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.35□□□□□ -0.11
Rrp1P56183 Gm18624-201ENSMUST00000220966 658 ntBASIC14.35□□□□□ -0.11
Rrp1P56183 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.35□□□□□ -0.11
Rrp1P56183 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp1P56183 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp1P56183 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.35□□□□□ -0.11
Rrp1P56183 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp1P56183 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp1P56183 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp1P56183 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp1P56183 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rrp1P56183 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
Rrp1P56183 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rrp1P56183 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp1P56183 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp1P56183 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp1P56183 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp1P56183 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp1P56183 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp1P56183 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.34□□□□□ -0.11
Rrp1P56183 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms