Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Msh6P54276 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Msh6P54276 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Msh6P54276 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Msh6P54276 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Msh6P54276 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Msh6P54276 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Msh6P54276 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Msh6P54276 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Msh6P54276 Gm5070-201ENSMUST00000177599 862 ntBASIC16.07■□□□□ 0.16
Msh6P54276 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
Msh6P54276 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Msh6P54276 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC16.07■□□□□ 0.16
Msh6P54276 Gm9555-201ENSMUST00000200908 583 ntBASIC16.07■□□□□ 0.16
Msh6P54276 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Msh6P54276 AC166344.1-202ENSMUST00000224139 234 ntBASIC16.07■□□□□ 0.16
Msh6P54276 Spcs1-203ENSMUST00000226374 592 ntBASIC16.07■□□□□ 0.16
Msh6P54276 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Msh6P54276 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Msh6P54276 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Msh6P54276 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Msh6P54276 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Msh6P54276 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Msh6P54276 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Msh6P54276 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Msh6P54276 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Msh6P54276 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Msh6P54276 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Msh6P54276 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC16.06■□□□□ 0.16
Msh6P54276 AC122197.2-201ENSMUST00000219196 1635 ntBASIC16.06■□□□□ 0.16
Msh6P54276 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Msh6P54276 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC16.06■□□□□ 0.16
Msh6P54276 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Msh6P54276 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Msh6P54276 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Msh6P54276 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Msh6P54276 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC16.06■□□□□ 0.16
Msh6P54276 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Msh6P54276 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC16.06■□□□□ 0.16
Msh6P54276 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC16.06■□□□□ 0.16
Msh6P54276 Gm14999-201ENSMUST00000121039 624 ntBASIC16.06■□□□□ 0.16
Msh6P54276 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC16.06■□□□□ 0.16
Msh6P54276 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC16.06■□□□□ 0.16
Msh6P54276 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC16.06■□□□□ 0.16
Msh6P54276 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Msh6P54276 Gm19187-201ENSMUST00000206781 892 ntBASIC16.06■□□□□ 0.16
Msh6P54276 Gm45598-202ENSMUST00000210719 986 ntBASIC16.06■□□□□ 0.16
Msh6P54276 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Msh6P54276 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
Msh6P54276 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Msh6P54276 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Msh6P54276 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Msh6P54276 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Msh6P54276 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Msh6P54276 Zkscan3-207ENSMUST00000223831 2101 ntBASIC16.06■□□□□ 0.16
Msh6P54276 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh6P54276 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh6P54276 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Msh6P54276 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh6P54276 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh6P54276 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Msh6P54276 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Msh6P54276 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh6P54276 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC16.05■□□□□ 0.16
Msh6P54276 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
Msh6P54276 Gm14760-201ENSMUST00000121831 999 ntBASIC16.05■□□□□ 0.16
Msh6P54276 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC16.05■□□□□ 0.16
Msh6P54276 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Msh6P54276 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC16.05■□□□□ 0.16
Msh6P54276 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC16.05■□□□□ 0.16
Msh6P54276 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC16.05■□□□□ 0.16
Msh6P54276 Aprt-ps-201ENSMUST00000212311 505 ntBASIC16.05■□□□□ 0.16
Msh6P54276 D9Wsu149-201ENSMUST00000214169 594 ntBASIC16.05■□□□□ 0.16
Msh6P54276 Dhrs4-202ENSMUST00000226168 828 ntBASIC16.05■□□□□ 0.16
Msh6P54276 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh6P54276 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh6P54276 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh6P54276 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh6P54276 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh6P54276 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh6P54276 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Msh6P54276 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Msh6P54276 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh6P54276 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh6P54276 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC16.04■□□□□ 0.16
Msh6P54276 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Msh6P54276 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Msh6P54276 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh6P54276 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh6P54276 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh6P54276 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh6P54276 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Msh6P54276 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh6P54276 Gm5638-201ENSMUST00000118618 1258 ntBASIC16.04■□□□□ 0.16
Msh6P54276 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Msh6P54276 Gm7207-201ENSMUST00000211575 1067 ntBASIC16.04■□□□□ 0.16
Msh6P54276 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC16.04■□□□□ 0.16
Msh6P54276 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh6P54276 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh6P54276 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms