Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atxn1P54254 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.69□□□□□ -0.38
Atxn1P54254 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atxn1P54254 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atxn1P54254 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atxn1P54254 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atxn1P54254 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atxn1P54254 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atxn1P54254 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Atxn1P54254 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atxn1P54254 Gm25214-201ENSMUST00000104573 129 ntBASIC12.69□□□□□ -0.38
Atxn1P54254 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atxn1P54254 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Atxn1P54254 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.69□□□□□ -0.38
Atxn1P54254 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atxn1P54254 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atxn1P54254 Gm12502-201ENSMUST00000120197 444 ntBASIC12.69□□□□□ -0.38
Atxn1P54254 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atxn1P54254 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.69□□□□□ -0.38
Atxn1P54254 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atxn1P54254 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atxn1P54254 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.69□□□□□ -0.38
Atxn1P54254 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.69□□□□□ -0.38
Atxn1P54254 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atxn1P54254 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atxn1P54254 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
Atxn1P54254 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atxn1P54254 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atxn1P54254 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.69□□□□□ -0.38
Atxn1P54254 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atxn1P54254 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atxn1P54254 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Atxn1P54254 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atxn1P54254 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atxn1P54254 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.68□□□□□ -0.38
Atxn1P54254 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Atxn1P54254 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atxn1P54254 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Atxn1P54254 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atxn1P54254 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atxn1P54254 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atxn1P54254 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atxn1P54254 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atxn1P54254 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atxn1P54254 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atxn1P54254 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Atxn1P54254 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atxn1P54254 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atxn1P54254 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atxn1P54254 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atxn1P54254 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Atxn1P54254 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Atxn1P54254 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Atxn1P54254 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Atxn1P54254 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Atxn1P54254 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Atxn1P54254 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atxn1P54254 Gm25700-201ENSMUST00000177693 110 ntBASIC12.68□□□□□ -0.38
Atxn1P54254 Gm44405-201ENSMUST00000198952 126 ntBASIC12.68□□□□□ -0.38
Atxn1P54254 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Atxn1P54254 Gm5950-201ENSMUST00000213337 772 ntBASIC12.68□□□□□ -0.38
Atxn1P54254 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.68□□□□□ -0.38
Atxn1P54254 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atxn1P54254 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Atxn1P54254 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atxn1P54254 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atxn1P54254 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Atxn1P54254 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Atxn1P54254 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
Atxn1P54254 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Atxn1P54254 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atxn1P54254 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Atxn1P54254 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atxn1P54254 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atxn1P54254 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atxn1P54254 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.68□□□□□ -0.38
Atxn1P54254 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Atxn1P54254 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atxn1P54254 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atxn1P54254 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atxn1P54254 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Atxn1P54254 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atxn1P54254 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.67□□□□□ -0.38
Atxn1P54254 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atxn1P54254 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atxn1P54254 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atxn1P54254 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atxn1P54254 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Atxn1P54254 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.67□□□□□ -0.38
Atxn1P54254 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atxn1P54254 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Atxn1P54254 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atxn1P54254 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.67□□□□□ -0.38
Atxn1P54254 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atxn1P54254 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atxn1P54254 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Atxn1P54254 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atxn1P54254 Gm15131-201ENSMUST00000119124 595 ntBASIC12.67□□□□□ -0.38
Atxn1P54254 Gm15547-201ENSMUST00000122152 333 ntBASIC12.67□□□□□ -0.38
Atxn1P54254 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms