Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fdft1P53798 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fdft1P53798 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fdft1P53798 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fdft1P53798 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fdft1P53798 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.76□□□□□ -0.37
Fdft1P53798 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Fdft1P53798 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.76□□□□□ -0.37
Fdft1P53798 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fdft1P53798 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fdft1P53798 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fdft1P53798 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fdft1P53798 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fdft1P53798 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Fdft1P53798 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fdft1P53798 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fdft1P53798 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fdft1P53798 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Fdft1P53798 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fdft1P53798 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.75□□□□□ -0.37
Fdft1P53798 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.75□□□□□ -0.37
Fdft1P53798 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Fdft1P53798 Gm11618-201ENSMUST00000117946 267 ntBASIC12.75□□□□□ -0.37
Fdft1P53798 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Fdft1P53798 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Fdft1P53798 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fdft1P53798 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Fdft1P53798 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.75□□□□□ -0.37
Fdft1P53798 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.75□□□□□ -0.37
Fdft1P53798 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.75□□□□□ -0.37
Fdft1P53798 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fdft1P53798 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Fdft1P53798 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fdft1P53798 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fdft1P53798 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fdft1P53798 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fdft1P53798 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fdft1P53798 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fdft1P53798 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fdft1P53798 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fdft1P53798 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fdft1P53798 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Fdft1P53798 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Fdft1P53798 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fdft1P53798 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.75□□□□□ -0.37
Fdft1P53798 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fdft1P53798 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Fdft1P53798 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fdft1P53798 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fdft1P53798 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fdft1P53798 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fdft1P53798 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Fdft1P53798 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Fdft1P53798 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Fdft1P53798 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fdft1P53798 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fdft1P53798 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.74□□□□□ -0.37
Fdft1P53798 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.74□□□□□ -0.37
Fdft1P53798 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fdft1P53798 Mir686-201ENSMUST00000102174 109 ntBASIC12.74□□□□□ -0.37
Fdft1P53798 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Fdft1P53798 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.74□□□□□ -0.37
Fdft1P53798 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.74□□□□□ -0.37
Fdft1P53798 Mir1894-201ENSMUST00000122802 81 ntBASIC12.74□□□□□ -0.37
Fdft1P53798 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Fdft1P53798 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fdft1P53798 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.74□□□□□ -0.37
Fdft1P53798 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fdft1P53798 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.74□□□□□ -0.37
Fdft1P53798 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.74□□□□□ -0.37
Fdft1P53798 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fdft1P53798 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fdft1P53798 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fdft1P53798 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fdft1P53798 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fdft1P53798 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Fdft1P53798 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Fdft1P53798 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.74□□□□□ -0.37
Fdft1P53798 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fdft1P53798 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fdft1P53798 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fdft1P53798 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fdft1P53798 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fdft1P53798 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Fdft1P53798 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Fdft1P53798 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fdft1P53798 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Fdft1P53798 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fdft1P53798 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fdft1P53798 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fdft1P53798 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fdft1P53798 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fdft1P53798 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fdft1P53798 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.73□□□□□ -0.37
Fdft1P53798 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.73□□□□□ -0.37
Fdft1P53798 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fdft1P53798 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Fdft1P53798 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fdft1P53798 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Fdft1P53798 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms