Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmga2P52927 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmga2P52927 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.84□□□□□ -0.67
Hmga2P52927 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.84□□□□□ -0.67
Hmga2P52927 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmga2P52927 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Hmga2P52927 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hmga2P52927 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmga2P52927 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hmga2P52927 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmga2P52927 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmga2P52927 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmga2P52927 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmga2P52927 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hmga2P52927 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Hmga2P52927 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmga2P52927 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmga2P52927 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmga2P52927 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmga2P52927 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hmga2P52927 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmga2P52927 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmga2P52927 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Hmga2P52927 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Hmga2P52927 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Hmga2P52927 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hmga2P52927 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmga2P52927 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hmga2P52927 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hmga2P52927 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC10.83□□□□□ -0.68
Hmga2P52927 Gm16202-201ENSMUST00000117532 544 ntBASIC10.83□□□□□ -0.68
Hmga2P52927 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC10.83□□□□□ -0.68
Hmga2P52927 Gm14921-201ENSMUST00000118643 908 ntBASIC10.83□□□□□ -0.68
Hmga2P52927 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Hmga2P52927 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.83□□□□□ -0.68
Hmga2P52927 Gm6458-201ENSMUST00000211573 635 ntBASIC10.83□□□□□ -0.68
Hmga2P52927 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.83□□□□□ -0.68
Hmga2P52927 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Hmga2P52927 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.83□□□□□ -0.68
Hmga2P52927 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmga2P52927 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmga2P52927 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Hmga2P52927 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Hmga2P52927 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmga2P52927 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hmga2P52927 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmga2P52927 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmga2P52927 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Hmga2P52927 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmga2P52927 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmga2P52927 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hmga2P52927 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.83□□□□□ -0.68
Hmga2P52927 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Hmga2P52927 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hmga2P52927 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmga2P52927 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hmga2P52927 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hmga2P52927 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hmga2P52927 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hmga2P52927 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Hmga2P52927 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Gm14701-201ENSMUST00000117156 348 ntBASIC10.82□□□□□ -0.68
Hmga2P52927 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.82□□□□□ -0.68
Hmga2P52927 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC10.82□□□□□ -0.68
Hmga2P52927 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Gm5354-201ENSMUST00000182417 973 ntBASIC10.82□□□□□ -0.68
Hmga2P52927 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.82□□□□□ -0.68
Hmga2P52927 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.82□□□□□ -0.68
Hmga2P52927 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC10.82□□□□□ -0.68
Hmga2P52927 Itm2b-204ENSMUST00000228637 783 ntBASIC10.82□□□□□ -0.68
Hmga2P52927 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC10.82□□□□□ -0.68
Hmga2P52927 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.82□□□□□ -0.68
Hmga2P52927 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.82□□□□□ -0.68
Hmga2P52927 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms