Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC15.04■□□□□ -0
LtbrP50284 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC15.04■□□□□ -0
LtbrP50284 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC15.04■□□□□ -0
LtbrP50284 Gm8913-201ENSMUST00000209491 641 ntBASIC15.04■□□□□ -0
LtbrP50284 Gm8712-201ENSMUST00000221090 701 ntBASIC15.04■□□□□ -0
LtbrP50284 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LtbrP50284 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.04■□□□□ -0
LtbrP50284 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
LtbrP50284 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.04■□□□□ -0
LtbrP50284 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LtbrP50284 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.04■□□□□ -0
LtbrP50284 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.04■□□□□ -0
LtbrP50284 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
LtbrP50284 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LtbrP50284 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.04■□□□□ -0
LtbrP50284 Gm5989-201ENSMUST00000096092 2077 ntBASIC15.04■□□□□ -0
LtbrP50284 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.04■□□□□ -0
LtbrP50284 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.04■□□□□ -0
LtbrP50284 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LtbrP50284 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LtbrP50284 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
LtbrP50284 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LtbrP50284 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
LtbrP50284 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
LtbrP50284 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.03■□□□□ -0
LtbrP50284 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LtbrP50284 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LtbrP50284 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LtbrP50284 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LtbrP50284 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
LtbrP50284 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LtbrP50284 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
LtbrP50284 Gm12467-201ENSMUST00000117625 745 ntBASIC15.03■□□□□ -0
LtbrP50284 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LtbrP50284 Gm12286-201ENSMUST00000119246 1002 ntBASIC15.03■□□□□ -0
LtbrP50284 Gm13408-201ENSMUST00000119822 798 ntBASIC15.03■□□□□ -0
LtbrP50284 Gm13935-201ENSMUST00000121859 798 ntBASIC15.03■□□□□ -0
LtbrP50284 Gm14126-201ENSMUST00000122345 395 ntBASIC15.03■□□□□ -0
LtbrP50284 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LtbrP50284 Gm7003-201ENSMUST00000195089 312 ntBASIC15.03■□□□□ -0
LtbrP50284 Gm9555-201ENSMUST00000200908 583 ntBASIC15.03■□□□□ -0
LtbrP50284 Gm45224-201ENSMUST00000208203 414 ntBASIC15.03■□□□□ -0
LtbrP50284 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
LtbrP50284 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LtbrP50284 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LtbrP50284 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.03■□□□□ -0
LtbrP50284 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LtbrP50284 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LtbrP50284 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LtbrP50284 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.02■□□□□ -0
LtbrP50284 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LtbrP50284 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LtbrP50284 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.02■□□□□ -0
LtbrP50284 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.02■□□□□ -0
LtbrP50284 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LtbrP50284 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
LtbrP50284 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LtbrP50284 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LtbrP50284 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
LtbrP50284 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC15.02■□□□□ -0
LtbrP50284 Gm15074-201ENSMUST00000117603 936 ntBASIC15.02■□□□□ -0
LtbrP50284 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LtbrP50284 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC15.02■□□□□ -0
LtbrP50284 Gm18595-201ENSMUST00000175736 1068 ntBASIC15.02■□□□□ -0
LtbrP50284 Mir6958-201ENSMUST00000184207 73 ntBASIC15.02■□□□□ -0
LtbrP50284 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC15.02■□□□□ -0
LtbrP50284 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC15.02■□□□□ -0
LtbrP50284 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC15.02■□□□□ -0
LtbrP50284 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC15.02■□□□□ -0
LtbrP50284 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC15.02■□□□□ -0
LtbrP50284 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LtbrP50284 AC154276.3-201ENSMUST00000227643 998 ntBASIC15.02■□□□□ -0
LtbrP50284 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC15.02■□□□□ -0
LtbrP50284 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LtbrP50284 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LtbrP50284 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LtbrP50284 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LtbrP50284 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LtbrP50284 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
LtbrP50284 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LtbrP50284 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LtbrP50284 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LtbrP50284 Gm37737-201ENSMUST00000195013 1638 ntBASIC15.02□□□□□ -0.01
LtbrP50284 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LtbrP50284 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
LtbrP50284 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC15.01□□□□□ -0.01
LtbrP50284 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.01□□□□□ -0.01
LtbrP50284 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LtbrP50284 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.01□□□□□ -0.01
LtbrP50284 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LtbrP50284 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LtbrP50284 AC126444.1-201ENSMUST00000225938 1768 ntBASIC15.01□□□□□ -0.01
LtbrP50284 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LtbrP50284 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LtbrP50284 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
LtbrP50284 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LtbrP50284 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC15.01□□□□□ -0.01
LtbrP50284 Gm16397-201ENSMUST00000122201 494 ntBASIC15.01□□□□□ -0.01
LtbrP50284 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC15.01□□□□□ -0.01
LtbrP50284 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms