Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brca1P48754 Matn2-206ENSMUST00000228570 2798 ntBASIC14.04□□□□□ -0.16
Brca1P48754 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brca1P48754 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brca1P48754 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brca1P48754 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brca1P48754 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Brca1P48754 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brca1P48754 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brca1P48754 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brca1P48754 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Brca1P48754 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Brca1P48754 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brca1P48754 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Brca1P48754 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brca1P48754 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Brca1P48754 Gm12579-201ENSMUST00000118040 783 ntBASIC14.04□□□□□ -0.16
Brca1P48754 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC14.04□□□□□ -0.16
Brca1P48754 Gm12164-201ENSMUST00000121695 551 ntBASIC14.04□□□□□ -0.16
Brca1P48754 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC14.04□□□□□ -0.16
Brca1P48754 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC14.04□□□□□ -0.16
Brca1P48754 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Brca1P48754 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brca1P48754 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Brca1P48754 Gm23045-201ENSMUST00000175041 96 ntBASIC14.04□□□□□ -0.16
Brca1P48754 Gm38228-201ENSMUST00000193169 1293 ntBASIC14.04□□□□□ -0.16
Brca1P48754 Gm43184-201ENSMUST00000197247 542 ntBASIC14.04□□□□□ -0.16
Brca1P48754 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Brca1P48754 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Brca1P48754 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brca1P48754 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Brca1P48754 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Brca1P48754 Gm9129-201ENSMUST00000218173 1689 ntBASIC14.03□□□□□ -0.16
Brca1P48754 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Brca1P48754 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Brca1P48754 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.03□□□□□ -0.16
Brca1P48754 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Brca1P48754 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Brca1P48754 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Brca1P48754 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Brca1P48754 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Brca1P48754 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.03□□□□□ -0.16
Brca1P48754 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Brca1P48754 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Brca1P48754 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Brca1P48754 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Brca1P48754 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Brca1P48754 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Brca1P48754 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Brca1P48754 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Brca1P48754 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Brca1P48754 Gm13668-201ENSMUST00000119237 1001 ntBASIC14.03□□□□□ -0.16
Brca1P48754 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.03□□□□□ -0.16
Brca1P48754 Gm13937-201ENSMUST00000121000 988 ntBASIC14.03□□□□□ -0.16
Brca1P48754 Gm4726-201ENSMUST00000135604 736 ntBASIC14.03□□□□□ -0.16
Brca1P48754 Gm6019-201ENSMUST00000148369 736 ntBASIC14.03□□□□□ -0.16
Brca1P48754 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC14.03□□□□□ -0.16
Brca1P48754 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.03□□□□□ -0.16
Brca1P48754 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC14.03□□□□□ -0.16
Brca1P48754 Gm2965-201ENSMUST00000198365 343 ntBASIC14.03□□□□□ -0.16
Brca1P48754 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.03□□□□□ -0.16
Brca1P48754 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC14.03□□□□□ -0.16
Brca1P48754 Gm9139-201ENSMUST00000218817 700 ntBASIC14.03□□□□□ -0.16
Brca1P48754 Gm18636-201ENSMUST00000218846 1066 ntBASIC14.03□□□□□ -0.16
Brca1P48754 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Brca1P48754 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.03□□□□□ -0.16
Brca1P48754 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Brca1P48754 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Brca1P48754 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Brca1P48754 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Brca1P48754 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Brca1P48754 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Brca1P48754 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Brca1P48754 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Brca1P48754 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Brca1P48754 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Brca1P48754 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Brca1P48754 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.02□□□□□ -0.16
Brca1P48754 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Brca1P48754 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Brca1P48754 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC14.02□□□□□ -0.16
Brca1P48754 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Brca1P48754 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC14.02□□□□□ -0.16
Brca1P48754 Mir8115-201ENSMUST00000184992 119 ntBASIC14.02□□□□□ -0.16
Brca1P48754 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.02□□□□□ -0.16
Brca1P48754 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Brca1P48754 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Brca1P48754 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Brca1P48754 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Brca1P48754 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Brca1P48754 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Brca1P48754 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Brca1P48754 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Brca1P48754 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Brca1P48754 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.02□□□□□ -0.17
Brca1P48754 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Brca1P48754 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Brca1P48754 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Brca1P48754 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Brca1P48754 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms