Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox2P48432 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox2P48432 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox2P48432 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox2P48432 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox2P48432 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox2P48432 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox2P48432 Gm13689-201ENSMUST00000119360 685 ntBASIC11.94□□□□□ -0.5
Sox2P48432 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.94□□□□□ -0.5
Sox2P48432 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox2P48432 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox2P48432 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.94□□□□□ -0.5
Sox2P48432 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.94□□□□□ -0.5
Sox2P48432 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Sox2P48432 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.94□□□□□ -0.5
Sox2P48432 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox2P48432 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox2P48432 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.94□□□□□ -0.5
Sox2P48432 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox2P48432 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox2P48432 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.94□□□□□ -0.5
Sox2P48432 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Sox2P48432 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox2P48432 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.94□□□□□ -0.5
Sox2P48432 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox2P48432 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox2P48432 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Sox2P48432 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox2P48432 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox2P48432 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox2P48432 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox2P48432 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.94□□□□□ -0.5
Sox2P48432 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox2P48432 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox2P48432 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox2P48432 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox2P48432 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox2P48432 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox2P48432 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.93□□□□□ -0.5
Sox2P48432 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox2P48432 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox2P48432 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox2P48432 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox2P48432 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Sox2P48432 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.93□□□□□ -0.5
Sox2P48432 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox2P48432 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Sox2P48432 Gm27306-201ENSMUST00000183970 107 ntBASIC11.93□□□□□ -0.5
Sox2P48432 Gm27989-201ENSMUST00000184721 107 ntBASIC11.93□□□□□ -0.5
Sox2P48432 Gm28760-201ENSMUST00000185995 736 ntBASIC11.93□□□□□ -0.5
Sox2P48432 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.93□□□□□ -0.5
Sox2P48432 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.93□□□□□ -0.5
Sox2P48432 Gm38223-201ENSMUST00000194484 695 ntBASIC11.93□□□□□ -0.5
Sox2P48432 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.93□□□□□ -0.5
Sox2P48432 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox2P48432 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.93□□□□□ -0.5
Sox2P48432 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox2P48432 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox2P48432 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox2P48432 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.93□□□□□ -0.5
Sox2P48432 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox2P48432 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox2P48432 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Sox2P48432 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox2P48432 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox2P48432 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.93□□□□□ -0.5
Sox2P48432 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox2P48432 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox2P48432 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox2P48432 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox2P48432 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox2P48432 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox2P48432 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox2P48432 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox2P48432 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox2P48432 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox2P48432 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox2P48432 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.92□□□□□ -0.5
Sox2P48432 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox2P48432 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.92□□□□□ -0.5
Sox2P48432 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox2P48432 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox2P48432 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Sox2P48432 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.92□□□□□ -0.5
Sox2P48432 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox2P48432 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox2P48432 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox2P48432 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox2P48432 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.92□□□□□ -0.5
Sox2P48432 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox2P48432 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox2P48432 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Sox2P48432 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Sox2P48432 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox2P48432 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.92□□□□□ -0.5
Sox2P48432 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Sox2P48432 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.92□□□□□ -0.5
Sox2P48432 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Sox2P48432 Gm6458-201ENSMUST00000211573 635 ntBASIC11.92□□□□□ -0.5
Sox2P48432 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms