Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Gm15573-201ENSMUST00000119487 540 ntBASIC15.28■□□□□ 0.04
Nedd4P46935 Gm13315-201ENSMUST00000120376 991 ntBASIC15.28■□□□□ 0.04
Nedd4P46935 Gm12196-201ENSMUST00000120954 262 ntBASIC15.28■□□□□ 0.04
Nedd4P46935 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC15.28■□□□□ 0.04
Nedd4P46935 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC15.28■□□□□ 0.04
Nedd4P46935 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC15.28■□□□□ 0.04
Nedd4P46935 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC15.28■□□□□ 0.04
Nedd4P46935 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC15.28■□□□□ 0.04
Nedd4P46935 AC163667.3-201ENSMUST00000225774 222 ntBASIC15.28■□□□□ 0.04
Nedd4P46935 AC156501.1-201ENSMUST00000228219 270 ntBASIC15.28■□□□□ 0.04
Nedd4P46935 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nedd4P46935 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC15.28■□□□□ 0.04
Nedd4P46935 Snora73b-201ENSMUST00000083419 205 ntBASIC15.28■□□□□ 0.04
Nedd4P46935 Gm5879-201ENSMUST00000089501 1209 ntBASIC15.28■□□□□ 0.04
Nedd4P46935 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nedd4P46935 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nedd4P46935 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nedd4P46935 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nedd4P46935 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nedd4P46935 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nedd4P46935 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nedd4P46935 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nedd4P46935 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nedd4P46935 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nedd4P46935 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nedd4P46935 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nedd4P46935 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nedd4P46935 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nedd4P46935 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nedd4P46935 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.28■□□□□ 0.04
Nedd4P46935 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nedd4P46935 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.27■□□□□ 0.04
Nedd4P46935 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nedd4P46935 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.27■□□□□ 0.04
Nedd4P46935 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nedd4P46935 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Nedd4P46935 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nedd4P46935 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nedd4P46935 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC15.27■□□□□ 0.04
Nedd4P46935 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nedd4P46935 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nedd4P46935 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
Nedd4P46935 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC15.27■□□□□ 0.04
Nedd4P46935 Mup-ps26-201ENSMUST00000121751 202 ntBASIC15.27■□□□□ 0.04
Nedd4P46935 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC15.27■□□□□ 0.04
Nedd4P46935 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Nedd4P46935 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nedd4P46935 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nedd4P46935 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nedd4P46935 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nedd4P46935 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nedd4P46935 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC15.27■□□□□ 0.04
Nedd4P46935 AC165260.3-202ENSMUST00000224550 1031 ntBASIC15.27■□□□□ 0.04
Nedd4P46935 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.27■□□□□ 0.03
Nedd4P46935 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nedd4P46935 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nedd4P46935 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nedd4P46935 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nedd4P46935 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nedd4P46935 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nedd4P46935 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nedd4P46935 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nedd4P46935 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nedd4P46935 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Nedd4P46935 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nedd4P46935 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Nedd4P46935 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nedd4P46935 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Nedd4P46935 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd4P46935 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd4P46935 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd4P46935 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd4P46935 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd4P46935 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Nedd4P46935 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd4P46935 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd4P46935 Gm22133-201ENSMUST00000102082 109 ntBASIC15.26■□□□□ 0.03
Nedd4P46935 Gm14314-201ENSMUST00000118225 1015 ntBASIC15.26■□□□□ 0.03
Nedd4P46935 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd4P46935 Gm22138-201ENSMUST00000158748 128 ntBASIC15.26■□□□□ 0.03
Nedd4P46935 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC15.26■□□□□ 0.03
Nedd4P46935 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd4P46935 Gm6771-201ENSMUST00000182716 1001 ntBASIC15.26■□□□□ 0.03
Nedd4P46935 Mir7677-201ENSMUST00000184226 67 ntBASIC15.26■□□□□ 0.03
Nedd4P46935 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC15.26■□□□□ 0.03
Nedd4P46935 Gm6905-201ENSMUST00000205729 511 ntBASIC15.26■□□□□ 0.03
Nedd4P46935 Gm17827-201ENSMUST00000211825 742 ntBASIC15.26■□□□□ 0.03
Nedd4P46935 AC153505.1-201ENSMUST00000218819 1071 ntBASIC15.26■□□□□ 0.03
Nedd4P46935 AC154290.1-201ENSMUST00000223786 1240 ntBASIC15.26■□□□□ 0.03
Nedd4P46935 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd4P46935 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Nedd4P46935 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd4P46935 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd4P46935 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd4P46935 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd4P46935 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Nedd4P46935 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd4P46935 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Nedd4P46935 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd4P46935 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms