Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Msh2P43247 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Msh2P43247 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.15□□□□□ -0.3
Msh2P43247 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Msh2P43247 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Msh2P43247 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Msh2P43247 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Msh2P43247 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Msh2P43247 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Msh2P43247 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Msh2P43247 Gm5356-201ENSMUST00000093326 615 ntBASIC13.15□□□□□ -0.3
Msh2P43247 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Msh2P43247 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Msh2P43247 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Msh2P43247 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Msh2P43247 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Msh2P43247 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Msh2P43247 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Msh2P43247 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Msh2P43247 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.15□□□□□ -0.3
Msh2P43247 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.15□□□□□ -0.3
Msh2P43247 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.15□□□□□ -0.3
Msh2P43247 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Msh2P43247 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Msh2P43247 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.15□□□□□ -0.31
Msh2P43247 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
Msh2P43247 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Msh2P43247 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.14□□□□□ -0.31
Msh2P43247 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Msh2P43247 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.14□□□□□ -0.31
Msh2P43247 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.14□□□□□ -0.31
Msh2P43247 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Msh2P43247 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Msh2P43247 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Msh2P43247 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Msh2P43247 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Msh2P43247 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.14□□□□□ -0.31
Msh2P43247 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Msh2P43247 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Msh2P43247 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.14□□□□□ -0.31
Msh2P43247 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Msh2P43247 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Msh2P43247 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Msh2P43247 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Msh2P43247 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Msh2P43247 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Msh2P43247 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Msh2P43247 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Msh2P43247 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Msh2P43247 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Msh2P43247 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Msh2P43247 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Msh2P43247 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Msh2P43247 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Msh2P43247 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Msh2P43247 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Msh2P43247 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Msh2P43247 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Msh2P43247 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.13□□□□□ -0.31
Msh2P43247 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Msh2P43247 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Msh2P43247 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Msh2P43247 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Msh2P43247 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Msh2P43247 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Msh2P43247 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.13□□□□□ -0.31
Msh2P43247 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.13□□□□□ -0.31
Msh2P43247 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
Msh2P43247 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Msh2P43247 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Msh2P43247 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Msh2P43247 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.13□□□□□ -0.31
Msh2P43247 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.13□□□□□ -0.31
Msh2P43247 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.13□□□□□ -0.31
Msh2P43247 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.13□□□□□ -0.31
Msh2P43247 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Msh2P43247 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Msh2P43247 Gm6244-201ENSMUST00000178732 841 ntBASIC13.13□□□□□ -0.31
Msh2P43247 Gm27892-201ENSMUST00000185017 106 ntBASIC13.13□□□□□ -0.31
Msh2P43247 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Msh2P43247 Gm7287-201ENSMUST00000205267 602 ntBASIC13.13□□□□□ -0.31
Msh2P43247 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.13□□□□□ -0.31
Msh2P43247 Gm18473-201ENSMUST00000220543 868 ntBASIC13.13□□□□□ -0.31
Msh2P43247 Itm2b-204ENSMUST00000228637 783 ntBASIC13.13□□□□□ -0.31
Msh2P43247 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Msh2P43247 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Msh2P43247 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Msh2P43247 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Msh2P43247 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Msh2P43247 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Msh2P43247 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Msh2P43247 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.13□□□□□ -0.31
Msh2P43247 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Msh2P43247 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Msh2P43247 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Msh2P43247 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Msh2P43247 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Msh2P43247 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Msh2P43247 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Msh2P43247 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms