Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LdlrP35951 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LdlrP35951 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.72□□□□□ -0.37
LdlrP35951 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LdlrP35951 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LdlrP35951 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LdlrP35951 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
LdlrP35951 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LdlrP35951 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LdlrP35951 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.71□□□□□ -0.37
LdlrP35951 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LdlrP35951 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LdlrP35951 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LdlrP35951 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
LdlrP35951 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LdlrP35951 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LdlrP35951 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LdlrP35951 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LdlrP35951 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LdlrP35951 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LdlrP35951 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LdlrP35951 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LdlrP35951 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.71□□□□□ -0.37
LdlrP35951 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.71□□□□□ -0.37
LdlrP35951 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.71□□□□□ -0.37
LdlrP35951 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LdlrP35951 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.71□□□□□ -0.37
LdlrP35951 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
LdlrP35951 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
LdlrP35951 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LdlrP35951 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.71□□□□□ -0.37
LdlrP35951 Gm44124-201ENSMUST00000204159 472 ntBASIC12.71□□□□□ -0.37
LdlrP35951 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LdlrP35951 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
LdlrP35951 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.71□□□□□ -0.37
LdlrP35951 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.71□□□□□ -0.37
LdlrP35951 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LdlrP35951 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LdlrP35951 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LdlrP35951 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LdlrP35951 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LdlrP35951 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LdlrP35951 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.71□□□□□ -0.38
LdlrP35951 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.71□□□□□ -0.38
LdlrP35951 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LdlrP35951 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
LdlrP35951 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LdlrP35951 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LdlrP35951 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LdlrP35951 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
LdlrP35951 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LdlrP35951 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LdlrP35951 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LdlrP35951 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LdlrP35951 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
LdlrP35951 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LdlrP35951 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.7□□□□□ -0.38
LdlrP35951 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LdlrP35951 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LdlrP35951 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
LdlrP35951 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LdlrP35951 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.7□□□□□ -0.38
LdlrP35951 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LdlrP35951 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LdlrP35951 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LdlrP35951 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LdlrP35951 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LdlrP35951 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.7□□□□□ -0.38
LdlrP35951 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LdlrP35951 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.7□□□□□ -0.38
LdlrP35951 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LdlrP35951 Gm27731-201ENSMUST00000185192 107 ntBASIC12.7□□□□□ -0.38
LdlrP35951 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.7□□□□□ -0.38
LdlrP35951 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.7□□□□□ -0.38
LdlrP35951 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.7□□□□□ -0.38
LdlrP35951 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.7□□□□□ -0.38
LdlrP35951 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.7□□□□□ -0.38
LdlrP35951 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LdlrP35951 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
LdlrP35951 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LdlrP35951 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LdlrP35951 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LdlrP35951 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LdlrP35951 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LdlrP35951 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LdlrP35951 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LdlrP35951 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LdlrP35951 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LdlrP35951 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LdlrP35951 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LdlrP35951 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.69□□□□□ -0.38
LdlrP35951 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LdlrP35951 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LdlrP35951 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LdlrP35951 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
LdlrP35951 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LdlrP35951 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LdlrP35951 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
LdlrP35951 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
LdlrP35951 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms