Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxc5P32043 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxc5P32043 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxc5P32043 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.84□□□□□ -0.51
Hoxc5P32043 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.84□□□□□ -0.51
Hoxc5P32043 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.51
Hoxc5P32043 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.83□□□□□ -0.52
Hoxc5P32043 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc5P32043 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Hoxc5P32043 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc5P32043 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc5P32043 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc5P32043 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc5P32043 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc5P32043 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc5P32043 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc5P32043 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.83□□□□□ -0.52
Hoxc5P32043 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc5P32043 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.83□□□□□ -0.52
Hoxc5P32043 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc5P32043 Gm8805-201ENSMUST00000117848 313 ntBASIC11.83□□□□□ -0.52
Hoxc5P32043 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.83□□□□□ -0.52
Hoxc5P32043 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc5P32043 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc5P32043 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc5P32043 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.83□□□□□ -0.52
Hoxc5P32043 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc5P32043 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc5P32043 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Hoxc5P32043 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Hoxc5P32043 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Hoxc5P32043 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc5P32043 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc5P32043 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc5P32043 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc5P32043 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.83□□□□□ -0.52
Hoxc5P32043 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Hoxc5P32043 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Hoxc5P32043 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Hoxc5P32043 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc5P32043 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.83□□□□□ -0.52
Hoxc5P32043 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc5P32043 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc5P32043 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Hoxc5P32043 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc5P32043 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Hoxc5P32043 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc5P32043 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc5P32043 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc5P32043 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc5P32043 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc5P32043 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Hoxc5P32043 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc5P32043 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc5P32043 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Hoxc5P32043 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc5P32043 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc5P32043 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc5P32043 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.82□□□□□ -0.52
Hoxc5P32043 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc5P32043 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.82□□□□□ -0.52
Hoxc5P32043 Gm13612-201ENSMUST00000119276 390 ntBASIC11.82□□□□□ -0.52
Hoxc5P32043 Gm11918-201ENSMUST00000121660 179 ntBASIC11.82□□□□□ -0.52
Hoxc5P32043 Gm12138-201ENSMUST00000122180 951 ntBASIC11.82□□□□□ -0.52
Hoxc5P32043 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.82□□□□□ -0.52
Hoxc5P32043 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc5P32043 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.82□□□□□ -0.52
Hoxc5P32043 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.82□□□□□ -0.52
Hoxc5P32043 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc5P32043 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.82□□□□□ -0.52
Hoxc5P32043 Gm28693-202ENSMUST00000190758 331 ntBASIC11.82□□□□□ -0.52
Hoxc5P32043 Gm8515-201ENSMUST00000194852 576 ntBASIC11.82□□□□□ -0.52
Hoxc5P32043 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc5P32043 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.82□□□□□ -0.52
Hoxc5P32043 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc5P32043 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc5P32043 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc5P32043 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc5P32043 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc5P32043 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc5P32043 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc5P32043 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.82□□□□□ -0.52
Hoxc5P32043 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc5P32043 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc5P32043 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc5P32043 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.81□□□□□ -0.52
Hoxc5P32043 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc5P32043 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc5P32043 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc5P32043 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.81□□□□□ -0.52
Hoxc5P32043 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc5P32043 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc5P32043 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc5P32043 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.81□□□□□ -0.52
Hoxc5P32043 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc5P32043 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.81□□□□□ -0.52
Hoxc5P32043 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Hoxc5P32043 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.81□□□□□ -0.52
Hoxc5P32043 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc5P32043 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms