Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Gm15703-201ENSMUST00000120250 880 ntBASIC13.63□□□□□ -0.23
Mmp3P28862 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.63□□□□□ -0.23
Mmp3P28862 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp3P28862 Gm24990-201ENSMUST00000157406 323 ntBASIC13.63□□□□□ -0.23
Mmp3P28862 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.63□□□□□ -0.23
Mmp3P28862 Gm25700-201ENSMUST00000177693 110 ntBASIC13.63□□□□□ -0.23
Mmp3P28862 Mir7070-201ENSMUST00000183657 86 ntBASIC13.63□□□□□ -0.23
Mmp3P28862 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.63□□□□□ -0.23
Mmp3P28862 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp3P28862 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp3P28862 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Mmp3P28862 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp3P28862 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp3P28862 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
Mmp3P28862 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp3P28862 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.63□□□□□ -0.23
Mmp3P28862 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp3P28862 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp3P28862 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp3P28862 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp3P28862 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.63□□□□□ -0.23
Mmp3P28862 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp3P28862 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp3P28862 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp3P28862 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp3P28862 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.63□□□□□ -0.23
Mmp3P28862 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Mmp3P28862 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp3P28862 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp3P28862 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp3P28862 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp3P28862 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp3P28862 Gm12314-201ENSMUST00000118104 538 ntBASIC13.62□□□□□ -0.23
Mmp3P28862 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp3P28862 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp3P28862 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.62□□□□□ -0.23
Mmp3P28862 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
Mmp3P28862 Gm16505-201ENSMUST00000179981 232 ntBASIC13.62□□□□□ -0.23
Mmp3P28862 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Mmp3P28862 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.62□□□□□ -0.23
Mmp3P28862 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Mmp3P28862 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp3P28862 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Mmp3P28862 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp3P28862 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Mmp3P28862 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp3P28862 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp3P28862 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp3P28862 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp3P28862 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp3P28862 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp3P28862 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp3P28862 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp3P28862 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp3P28862 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp3P28862 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp3P28862 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp3P28862 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp3P28862 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Mmp3P28862 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Mmp3P28862 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Mmp3P28862 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp3P28862 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp3P28862 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp3P28862 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Mmp3P28862 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp3P28862 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp3P28862 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Mmp3P28862 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Mmp3P28862 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp3P28862 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.61□□□□□ -0.23
Mmp3P28862 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp3P28862 Gm26361-201ENSMUST00000158868 186 ntBASIC13.61□□□□□ -0.23
Mmp3P28862 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp3P28862 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
Mmp3P28862 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp3P28862 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.61□□□□□ -0.23
Mmp3P28862 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.61□□□□□ -0.23
Mmp3P28862 Gm28882-201ENSMUST00000185504 314 ntBASIC13.61□□□□□ -0.23
Mmp3P28862 Gm18212-201ENSMUST00000211678 889 ntBASIC13.61□□□□□ -0.23
Mmp3P28862 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.61□□□□□ -0.23
Mmp3P28862 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Mmp3P28862 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.61□□□□□ -0.23
Mmp3P28862 Gm10076-201ENSMUST00000073238 384 ntBASIC13.61□□□□□ -0.23
Mmp3P28862 Gm10312-201ENSMUST00000078515 489 ntBASIC13.61□□□□□ -0.23
Mmp3P28862 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Mmp3P28862 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp3P28862 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp3P28862 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp3P28862 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Mmp3P28862 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp3P28862 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp3P28862 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.61□□□□□ -0.23
Mmp3P28862 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp3P28862 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp3P28862 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp3P28862 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Mmp3P28862 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp3P28862 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Mmp3P28862 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms