Protein–RNA interactions for Protein: P28230

Gjb1, Gap junction beta-1 protein, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gjb1P28230 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gjb1P28230 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gjb1P28230 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.19□□□□□ -0.14
Gjb1P28230 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gjb1P28230 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
Gjb1P28230 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gjb1P28230 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gjb1P28230 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
Gjb1P28230 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.18□□□□□ -0.14
Gjb1P28230 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gjb1P28230 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gjb1P28230 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Gjb1P28230 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.18□□□□□ -0.14
Gjb1P28230 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gjb1P28230 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gjb1P28230 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gjb1P28230 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gjb1P28230 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gjb1P28230 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC14.18□□□□□ -0.14
Gjb1P28230 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC14.18□□□□□ -0.14
Gjb1P28230 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gjb1P28230 Gm5616-201ENSMUST00000165252 384 ntBASIC14.18□□□□□ -0.14
Gjb1P28230 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gjb1P28230 Gm8741-201ENSMUST00000174736 384 ntBASIC14.18□□□□□ -0.14
Gjb1P28230 Gm8492-201ENSMUST00000182375 987 ntBASIC14.18□□□□□ -0.14
Gjb1P28230 Mir6546-201ENSMUST00000184460 62 ntBASIC14.18□□□□□ -0.14
Gjb1P28230 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.18□□□□□ -0.14
Gjb1P28230 Gm19166-201ENSMUST00000196041 1063 ntBASIC14.18□□□□□ -0.14
Gjb1P28230 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Gjb1P28230 CT485607.1-201ENSMUST00000216100 85 ntBASIC14.18□□□□□ -0.14
Gjb1P28230 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.18□□□□□ -0.14
Gjb1P28230 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC14.18□□□□□ -0.14
Gjb1P28230 CT030637.1-201ENSMUST00000228016 669 ntBASIC14.18□□□□□ -0.14
Gjb1P28230 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gjb1P28230 Gm25517-201ENSMUST00000083865 134 ntBASIC14.18□□□□□ -0.14
Gjb1P28230 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gjb1P28230 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gjb1P28230 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gjb1P28230 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gjb1P28230 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gjb1P28230 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.18□□□□□ -0.14
Gjb1P28230 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gjb1P28230 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gjb1P28230 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gjb1P28230 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gjb1P28230 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gjb1P28230 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gjb1P28230 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gjb1P28230 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gjb1P28230 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gjb1P28230 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gjb1P28230 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gjb1P28230 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gjb1P28230 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gjb1P28230 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.17□□□□□ -0.14
Gjb1P28230 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Gjb1P28230 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Gjb1P28230 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gjb1P28230 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gjb1P28230 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Gjb1P28230 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gjb1P28230 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gjb1P28230 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gjb1P28230 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Gjb1P28230 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC14.17□□□□□ -0.14
Gjb1P28230 Gm15881-201ENSMUST00000148792 942 ntBASIC14.17□□□□□ -0.14
Gjb1P28230 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC14.17□□□□□ -0.14
Gjb1P28230 Gm25072-201ENSMUST00000175233 235 ntBASIC14.17□□□□□ -0.14
Gjb1P28230 Gm23153-201ENSMUST00000175323 313 ntBASIC14.17□□□□□ -0.14
Gjb1P28230 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gjb1P28230 Gm17889-201ENSMUST00000198410 598 ntBASIC14.17□□□□□ -0.14
Gjb1P28230 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC14.17□□□□□ -0.14
Gjb1P28230 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gjb1P28230 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gjb1P28230 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gjb1P28230 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gjb1P28230 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC14.17□□□□□ -0.14
Gjb1P28230 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.17□□□□□ -0.14
Gjb1P28230 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gjb1P28230 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.17□□□□□ -0.14
Gjb1P28230 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gjb1P28230 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gjb1P28230 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gjb1P28230 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Gjb1P28230 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gjb1P28230 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gjb1P28230 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gjb1P28230 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gjb1P28230 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gjb1P28230 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gjb1P28230 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gjb1P28230 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.16□□□□□ -0.14
Gjb1P28230 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.16□□□□□ -0.14
Gjb1P28230 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gjb1P28230 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.16□□□□□ -0.14
Gjb1P28230 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gjb1P28230 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gjb1P28230 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.16□□□□□ -0.14
Gjb1P28230 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gjb1P28230 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms