Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm12384-201ENSMUST00000119228 919 ntBASIC11.82□□□□□ -0.52
Cd40lgP27548 Gm27731-201ENSMUST00000185192 107 ntBASIC11.82□□□□□ -0.52
Cd40lgP27548 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.82□□□□□ -0.52
Cd40lgP27548 Gm8598-201ENSMUST00000221184 836 ntBASIC11.82□□□□□ -0.52
Cd40lgP27548 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.82□□□□□ -0.52
Cd40lgP27548 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd40lgP27548 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd40lgP27548 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd40lgP27548 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cd40lgP27548 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd40lgP27548 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd40lgP27548 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cd40lgP27548 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd40lgP27548 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd40lgP27548 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd40lgP27548 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cd40lgP27548 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd40lgP27548 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd40lgP27548 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd40lgP27548 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd40lgP27548 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd40lgP27548 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cd40lgP27548 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Cd40lgP27548 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd40lgP27548 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd40lgP27548 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd40lgP27548 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd40lgP27548 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd40lgP27548 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd40lgP27548 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd40lgP27548 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd40lgP27548 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cd40lgP27548 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd40lgP27548 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd40lgP27548 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd40lgP27548 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd40lgP27548 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd40lgP27548 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd40lgP27548 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd40lgP27548 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cd40lgP27548 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cd40lgP27548 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cd40lgP27548 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd40lgP27548 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd40lgP27548 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd40lgP27548 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd40lgP27548 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.81□□□□□ -0.52
Cd40lgP27548 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cd40lgP27548 Gm12742-201ENSMUST00000117326 410 ntBASIC11.81□□□□□ -0.52
Cd40lgP27548 Gm13369-201ENSMUST00000119442 987 ntBASIC11.81□□□□□ -0.52
Cd40lgP27548 Gm2231-201ENSMUST00000125661 612 ntBASIC11.81□□□□□ -0.52
Cd40lgP27548 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd40lgP27548 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.81□□□□□ -0.52
Cd40lgP27548 Gm26185-201ENSMUST00000157692 266 ntBASIC11.81□□□□□ -0.52
Cd40lgP27548 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd40lgP27548 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.81□□□□□ -0.52
Cd40lgP27548 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd40lgP27548 Gm27331-201ENSMUST00000183705 60 ntBASIC11.81□□□□□ -0.52
Cd40lgP27548 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.81□□□□□ -0.52
Cd40lgP27548 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd40lgP27548 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd40lgP27548 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cd40lgP27548 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cd40lgP27548 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.81□□□□□ -0.52
Cd40lgP27548 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd40lgP27548 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cd40lgP27548 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd40lgP27548 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd40lgP27548 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd40lgP27548 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd40lgP27548 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd40lgP27548 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd40lgP27548 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd40lgP27548 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd40lgP27548 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Cd40lgP27548 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd40lgP27548 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.81□□□□□ -0.52
Cd40lgP27548 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cd40lgP27548 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cd40lgP27548 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.8□□□□□ -0.52
Cd40lgP27548 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.8□□□□□ -0.52
Cd40lgP27548 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cd40lgP27548 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms