Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UbbP0CG49 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.11□□□□□ -0.63
UbbP0CG49 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UbbP0CG49 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
UbbP0CG49 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UbbP0CG49 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
UbbP0CG49 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UbbP0CG49 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UbbP0CG49 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UbbP0CG49 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UbbP0CG49 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UbbP0CG49 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UbbP0CG49 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
UbbP0CG49 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
UbbP0CG49 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UbbP0CG49 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
UbbP0CG49 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
UbbP0CG49 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.11□□□□□ -0.63
UbbP0CG49 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.11□□□□□ -0.63
UbbP0CG49 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.11□□□□□ -0.63
UbbP0CG49 Gm11978-201ENSMUST00000122315 466 ntBASIC11.11□□□□□ -0.63
UbbP0CG49 Gm24694-201ENSMUST00000180054 110 ntBASIC11.11□□□□□ -0.63
UbbP0CG49 Gm27663-201ENSMUST00000184839 110 ntBASIC11.11□□□□□ -0.63
UbbP0CG49 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.11□□□□□ -0.63
UbbP0CG49 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
UbbP0CG49 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
UbbP0CG49 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UbbP0CG49 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UbbP0CG49 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
UbbP0CG49 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UbbP0CG49 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UbbP0CG49 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.11□□□□□ -0.63
UbbP0CG49 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.11□□□□□ -0.63
UbbP0CG49 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UbbP0CG49 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.11□□□□□ -0.63
UbbP0CG49 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UbbP0CG49 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.11□□□□□ -0.63
UbbP0CG49 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UbbP0CG49 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UbbP0CG49 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
UbbP0CG49 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UbbP0CG49 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UbbP0CG49 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
UbbP0CG49 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
UbbP0CG49 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
UbbP0CG49 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
UbbP0CG49 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
UbbP0CG49 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
UbbP0CG49 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
UbbP0CG49 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
UbbP0CG49 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.1□□□□□ -0.63
UbbP0CG49 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
UbbP0CG49 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.1□□□□□ -0.63
UbbP0CG49 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.1□□□□□ -0.63
UbbP0CG49 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
UbbP0CG49 Mir8102-201ENSMUST00000184148 139 ntBASIC11.1□□□□□ -0.63
UbbP0CG49 Gm27989-201ENSMUST00000184721 107 ntBASIC11.1□□□□□ -0.63
UbbP0CG49 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.1□□□□□ -0.63
UbbP0CG49 Gm29667-201ENSMUST00000190817 490 ntBASIC11.1□□□□□ -0.63
UbbP0CG49 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.1□□□□□ -0.63
UbbP0CG49 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
UbbP0CG49 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
UbbP0CG49 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.1□□□□□ -0.63
UbbP0CG49 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UbbP0CG49 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms