Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
PrnpP04925 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
PrnpP04925 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
PrnpP04925 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PrnpP04925 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
PrnpP04925 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
PrnpP04925 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.17□□□□□ -0.3
PrnpP04925 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
PrnpP04925 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrnpP04925 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.17□□□□□ -0.3
PrnpP04925 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PrnpP04925 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.17□□□□□ -0.3
PrnpP04925 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.17□□□□□ -0.3
PrnpP04925 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.17□□□□□ -0.3
PrnpP04925 Gm20426-201ENSMUST00000173657 440 ntBASIC13.17□□□□□ -0.3
PrnpP04925 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
PrnpP04925 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.17□□□□□ -0.3
PrnpP04925 Gm24514-201ENSMUST00000174961 285 ntBASIC13.17□□□□□ -0.3
PrnpP04925 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.17□□□□□ -0.3
PrnpP04925 Gm5523-201ENSMUST00000180415 997 ntBASIC13.17□□□□□ -0.3
PrnpP04925 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.17□□□□□ -0.3
PrnpP04925 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC13.17□□□□□ -0.3
PrnpP04925 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.17□□□□□ -0.3
PrnpP04925 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PrnpP04925 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.17□□□□□ -0.3
PrnpP04925 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrnpP04925 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrnpP04925 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrnpP04925 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrnpP04925 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrnpP04925 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrnpP04925 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrnpP04925 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrnpP04925 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
PrnpP04925 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrnpP04925 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.17□□□□□ -0.3
PrnpP04925 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrnpP04925 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrnpP04925 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrnpP04925 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PrnpP04925 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrnpP04925 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrnpP04925 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.17□□□□□ -0.3
PrnpP04925 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PrnpP04925 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrnpP04925 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.16□□□□□ -0.3
PrnpP04925 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.16□□□□□ -0.3
PrnpP04925 Gm37666-201ENSMUST00000194110 866 ntBASIC13.16□□□□□ -0.3
PrnpP04925 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.16□□□□□ -0.3
PrnpP04925 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.16□□□□□ -0.3
PrnpP04925 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.16□□□□□ -0.3
PrnpP04925 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
PrnpP04925 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
PrnpP04925 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.16□□□□□ -0.3
PrnpP04925 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
PrnpP04925 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrnpP04925 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.15□□□□□ -0.3
PrnpP04925 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PrnpP04925 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PrnpP04925 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PrnpP04925 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
PrnpP04925 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.15□□□□□ -0.3
PrnpP04925 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PrnpP04925 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PrnpP04925 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PrnpP04925 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms