Protein–RNA interactions for Protein: P04202

Tgfb1, Transforming growth factor beta-1, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1P04202 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tgfb1P04202 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tgfb1P04202 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tgfb1P04202 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tgfb1P04202 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tgfb1P04202 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.8□□□□□ -0.52
Tgfb1P04202 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tgfb1P04202 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tgfb1P04202 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tgfb1P04202 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tgfb1P04202 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tgfb1P04202 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tgfb1P04202 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tgfb1P04202 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tgfb1P04202 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Tgfb1P04202 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tgfb1P04202 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tgfb1P04202 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tgfb1P04202 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tgfb1P04202 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.79□□□□□ -0.52
Tgfb1P04202 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Tgfb1P04202 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.79□□□□□ -0.52
Tgfb1P04202 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Tgfb1P04202 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.79□□□□□ -0.52
Tgfb1P04202 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.79□□□□□ -0.52
Tgfb1P04202 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.79□□□□□ -0.52
Tgfb1P04202 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.79□□□□□ -0.52
Tgfb1P04202 Gm27839-201ENSMUST00000184242 106 ntBASIC11.79□□□□□ -0.52
Tgfb1P04202 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Gm37319-201ENSMUST00000193500 636 ntBASIC11.79□□□□□ -0.52
Tgfb1P04202 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.79□□□□□ -0.52
Tgfb1P04202 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.79□□□□□ -0.52
Tgfb1P04202 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tgfb1P04202 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tgfb1P04202 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tgfb1P04202 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tgfb1P04202 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
Tgfb1P04202 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tgfb1P04202 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tgfb1P04202 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tgfb1P04202 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tgfb1P04202 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tgfb1P04202 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tgfb1P04202 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.78□□□□□ -0.52
Tgfb1P04202 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
Tgfb1P04202 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Tgfb1P04202 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Tgfb1P04202 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tgfb1P04202 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tgfb1P04202 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tgfb1P04202 Gm14921-201ENSMUST00000118643 908 ntBASIC11.78□□□□□ -0.52
Tgfb1P04202 Gm16296-201ENSMUST00000159905 325 ntBASIC11.78□□□□□ -0.52
Tgfb1P04202 Gm27847-201ENSMUST00000183711 107 ntBASIC11.78□□□□□ -0.52
Tgfb1P04202 Gm27375-201ENSMUST00000183799 107 ntBASIC11.78□□□□□ -0.52
Tgfb1P04202 Gm27486-201ENSMUST00000184923 80 ntBASIC11.78□□□□□ -0.52
Tgfb1P04202 Gm42660-201ENSMUST00000197733 947 ntBASIC11.78□□□□□ -0.52
Tgfb1P04202 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.78□□□□□ -0.52
Tgfb1P04202 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tgfb1P04202 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tgfb1P04202 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tgfb1P04202 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tgfb1P04202 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.78□□□□□ -0.52
Tgfb1P04202 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tgfb1P04202 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tgfb1P04202 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms