Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col4a1P02463 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col4a1P02463 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col4a1P02463 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col4a1P02463 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col4a1P02463 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Col4a1P02463 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Col4a1P02463 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Col4a1P02463 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC15.36■□□□□ 0.05
Col4a1P02463 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col4a1P02463 Gm10179-201ENSMUST00000086233 688 ntBASIC15.36■□□□□ 0.05
Col4a1P02463 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col4a1P02463 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col4a1P02463 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col4a1P02463 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col4a1P02463 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Col4a1P02463 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
Col4a1P02463 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col4a1P02463 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col4a1P02463 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col4a1P02463 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col4a1P02463 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col4a1P02463 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col4a1P02463 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col4a1P02463 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col4a1P02463 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col4a1P02463 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col4a1P02463 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col4a1P02463 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col4a1P02463 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Col4a1P02463 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col4a1P02463 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col4a1P02463 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col4a1P02463 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col4a1P02463 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.35■□□□□ 0.05
Col4a1P02463 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col4a1P02463 Gm9387-201ENSMUST00000098624 1320 ntBASIC15.35■□□□□ 0.05
Col4a1P02463 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col4a1P02463 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col4a1P02463 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col4a1P02463 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Col4a1P02463 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col4a1P02463 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col4a1P02463 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC15.35■□□□□ 0.05
Col4a1P02463 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Col4a1P02463 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col4a1P02463 AC126262.1-201ENSMUST00000221802 1904 ntBASIC15.35■□□□□ 0.05
Col4a1P02463 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col4a1P02463 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Col4a1P02463 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Col4a1P02463 Gm15573-201ENSMUST00000119487 540 ntBASIC15.35■□□□□ 0.05
Col4a1P02463 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC15.35■□□□□ 0.05
Col4a1P02463 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC15.35■□□□□ 0.05
Col4a1P02463 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC15.35■□□□□ 0.05
Col4a1P02463 Gm9540-201ENSMUST00000188230 478 ntBASIC15.35■□□□□ 0.05
Col4a1P02463 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Col4a1P02463 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC15.35■□□□□ 0.05
Col4a1P02463 Gm45909-201ENSMUST00000212413 1031 ntBASIC15.35■□□□□ 0.05
Col4a1P02463 CT571245.2-201ENSMUST00000218421 305 ntBASIC15.35■□□□□ 0.05
Col4a1P02463 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Col4a1P02463 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col4a1P02463 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col4a1P02463 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Col4a1P02463 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col4a1P02463 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col4a1P02463 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Col4a1P02463 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col4a1P02463 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col4a1P02463 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col4a1P02463 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Col4a1P02463 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Col4a1P02463 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Col4a1P02463 Gm6397-201ENSMUST00000161973 1069 ntBASIC15.34■□□□□ 0.05
Col4a1P02463 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Col4a1P02463 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Col4a1P02463 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col4a1P02463 Gm43916-201ENSMUST00000205062 967 ntBASIC15.34■□□□□ 0.05
Col4a1P02463 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC15.34■□□□□ 0.05
Col4a1P02463 Gm7551-201ENSMUST00000089593 1074 ntBASIC15.34■□□□□ 0.05
Col4a1P02463 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col4a1P02463 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col4a1P02463 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col4a1P02463 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Col4a1P02463 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.34■□□□□ 0.05
Col4a1P02463 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col4a1P02463 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col4a1P02463 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Col4a1P02463 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Col4a1P02463 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Col4a1P02463 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col4a1P02463 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC15.33■□□□□ 0.04
Col4a1P02463 Gm44942-201ENSMUST00000096093 2072 ntBASIC15.33■□□□□ 0.04
Col4a1P02463 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC15.33■□□□□ 0.04
Col4a1P02463 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col4a1P02463 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col4a1P02463 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Col4a1P02463 AC130671.2-201ENSMUST00000227224 1621 ntBASIC15.33■□□□□ 0.04
Col4a1P02463 Gm38355-201ENSMUST00000192514 1570 ntBASIC15.33■□□□□ 0.04
Col4a1P02463 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Col4a1P02463 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms