Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
P01852 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
P01852 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.68□□□□□ -0.54
P01852 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
P01852 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
P01852 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.68□□□□□ -0.54
P01852 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
P01852 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.68□□□□□ -0.54
P01852 Gm12363-201ENSMUST00000122250 668 ntBASIC11.68□□□□□ -0.54
P01852 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Gm16379-201ENSMUST00000161469 348 ntBASIC11.68□□□□□ -0.54
P01852 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.68□□□□□ -0.54
P01852 Gm17420-201ENSMUST00000164753 153 ntBASIC11.68□□□□□ -0.54
P01852 Gm8762-201ENSMUST00000193486 339 ntBASIC11.68□□□□□ -0.54
P01852 Snora73a-201ENSMUST00000082453 205 ntBASIC11.68□□□□□ -0.54
P01852 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
P01852 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
P01852 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
P01852 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01852 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.67□□□□□ -0.54
P01852 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01852 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01852 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01852 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
P01852 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01852 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
P01852 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
P01852 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
P01852 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01852 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
P01852 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
P01852 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01852 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
P01852 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01852 Gm23931-201ENSMUST00000103842 109 ntBASIC11.67□□□□□ -0.54
P01852 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
P01852 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
P01852 Gm22121-201ENSMUST00000175148 54 ntBASIC11.67□□□□□ -0.54
P01852 Gm8099-201ENSMUST00000200510 742 ntBASIC11.67□□□□□ -0.54
P01852 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.67□□□□□ -0.54
P01852 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
P01852 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
P01852 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01852 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01852 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.67□□□□□ -0.54
P01852 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01852 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01852 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01852 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01852 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01852 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01852 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P01852 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P01852 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
P01852 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P01852 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P01852 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
P01852 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
P01852 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
P01852 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
P01852 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
P01852 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
P01852 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P01852 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P01852 Gm5187-201ENSMUST00000117317 991 ntBASIC11.66□□□□□ -0.54
P01852 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
P01852 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
P01852 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.66□□□□□ -0.54
P01852 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
P01852 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms