Protein–RNA interactions for Protein: P01800

Ig heavy chain V-III region T957, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01800 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01800 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
P01800 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01800 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01800 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P01800 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P01800 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
P01800 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
P01800 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.19□□□□□ -0.62
P01800 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
P01800 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.19□□□□□ -0.62
P01800 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
P01800 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P01800 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P01800 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P01800 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
P01800 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.18□□□□□ -0.62
P01800 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P01800 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.18□□□□□ -0.62
P01800 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
P01800 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P01800 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P01800 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.18□□□□□ -0.62
P01800 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P01800 Gm14350-201ENSMUST00000116642 640 ntBASIC11.18□□□□□ -0.62
P01800 Gm16202-201ENSMUST00000117532 544 ntBASIC11.18□□□□□ -0.62
P01800 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P01800 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.18□□□□□ -0.62
P01800 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.18□□□□□ -0.62
P01800 Gm43438-201ENSMUST00000198133 379 ntBASIC11.18□□□□□ -0.62
P01800 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.18□□□□□ -0.62
P01800 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P01800 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.18□□□□□ -0.62
P01800 Itm2b-204ENSMUST00000228637 783 ntBASIC11.18□□□□□ -0.62
P01800 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P01800 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P01800 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P01800 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
P01800 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
P01800 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
P01800 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P01800 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P01800 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P01800 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P01800 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
P01800 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
P01800 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
P01800 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P01800 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
P01800 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.17□□□□□ -0.62
P01800 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P01800 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P01800 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P01800 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P01800 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
P01800 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.17□□□□□ -0.62
P01800 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
P01800 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P01800 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.17□□□□□ -0.62
P01800 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P01800 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P01800 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P01800 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
P01800 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P01800 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
P01800 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P01800 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.17□□□□□ -0.62
P01800 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P01800 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.17□□□□□ -0.62
P01800 Gm13813-201ENSMUST00000120998 787 ntBASIC11.17□□□□□ -0.62
P01800 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P01800 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.17□□□□□ -0.62
P01800 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
P01800 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.17□□□□□ -0.62
P01800 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.17□□□□□ -0.62
P01800 Gm44397-201ENSMUST00000195950 113 ntBASIC11.17□□□□□ -0.62
P01800 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.17□□□□□ -0.62
P01800 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P01800 Gm18062-201ENSMUST00000208020 547 ntBASIC11.17□□□□□ -0.62
P01800 Gm18055-201ENSMUST00000208254 547 ntBASIC11.17□□□□□ -0.62
P01800 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
P01800 Gm6983-201ENSMUST00000214912 628 ntBASIC11.17□□□□□ -0.62
P01800 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.17□□□□□ -0.62
P01800 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P01800 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.17□□□□□ -0.62
P01800 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.17□□□□□ -0.62
P01800 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P01800 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
P01800 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P01800 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P01800 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P01800 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.17□□□□□ -0.62
P01800 Matn2-203ENSMUST00000226766 3252 ntBASIC11.17□□□□□ -0.62
P01800 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
P01800 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P01800 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P01800 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P01800 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P01800 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P01800 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms