Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.03□□□□□ -0.48
Matn4O89029 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Matn4O89029 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Matn4O89029 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.03□□□□□ -0.48
Matn4O89029 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Matn4O89029 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.03□□□□□ -0.48
Matn4O89029 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Matn4O89029 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Matn4O89029 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Matn4O89029 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Matn4O89029 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Matn4O89029 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Matn4O89029 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Matn4O89029 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Matn4O89029 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Matn4O89029 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.02□□□□□ -0.49
Matn4O89029 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Matn4O89029 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Matn4O89029 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Matn4O89029 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Matn4O89029 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.02□□□□□ -0.49
Matn4O89029 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Matn4O89029 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Matn4O89029 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Matn4O89029 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Matn4O89029 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Matn4O89029 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Matn4O89029 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Matn4O89029 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Matn4O89029 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Matn4O89029 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.02□□□□□ -0.49
Matn4O89029 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Matn4O89029 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.02□□□□□ -0.49
Matn4O89029 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Matn4O89029 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Matn4O89029 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.02□□□□□ -0.49
Matn4O89029 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Matn4O89029 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Matn4O89029 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Matn4O89029 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Matn4O89029 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Matn4O89029 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Matn4O89029 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Matn4O89029 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Matn4O89029 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Matn4O89029 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Matn4O89029 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Matn4O89029 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn4O89029 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Matn4O89029 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn4O89029 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn4O89029 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn4O89029 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn4O89029 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn4O89029 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Matn4O89029 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Matn4O89029 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Matn4O89029 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn4O89029 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn4O89029 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn4O89029 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.01□□□□□ -0.49
Matn4O89029 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Matn4O89029 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn4O89029 Gm11618-201ENSMUST00000117946 267 ntBASIC12.01□□□□□ -0.49
Matn4O89029 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Matn4O89029 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.01□□□□□ -0.49
Matn4O89029 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.01□□□□□ -0.49
Matn4O89029 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.01□□□□□ -0.49
Matn4O89029 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Matn4O89029 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.01□□□□□ -0.49
Matn4O89029 Gm18624-201ENSMUST00000220966 658 ntBASIC12.01□□□□□ -0.49
Matn4O89029 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.01□□□□□ -0.49
Matn4O89029 Gm8227-201ENSMUST00000223306 571 ntBASIC12.01□□□□□ -0.49
Matn4O89029 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn4O89029 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn4O89029 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Matn4O89029 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.01□□□□□ -0.49
Matn4O89029 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn4O89029 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn4O89029 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn4O89029 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Matn4O89029 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Matn4O89029 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn4O89029 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Matn4O89029 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Matn4O89029 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Matn4O89029 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12□□□□□ -0.49
Matn4O89029 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12□□□□□ -0.49
Matn4O89029 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Matn4O89029 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Matn4O89029 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Matn4O89029 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Matn4O89029 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Matn4O89029 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Matn4O89029 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12□□□□□ -0.49
Matn4O89029 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Matn4O89029 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Matn4O89029 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12□□□□□ -0.49
Matn4O89029 Gm15703-201ENSMUST00000120250 880 ntBASIC12□□□□□ -0.49
Matn4O89029 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms