Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Stx1aO35526 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Stx1aO35526 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Stx1aO35526 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Stx1aO35526 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Stx1aO35526 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Stx1aO35526 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Stx1aO35526 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.32□□□□□ -0.12
Stx1aO35526 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
Stx1aO35526 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Stx1aO35526 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.32□□□□□ -0.12
Stx1aO35526 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Stx1aO35526 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Stx1aO35526 Gm28693-202ENSMUST00000190758 331 ntBASIC14.32□□□□□ -0.12
Stx1aO35526 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.32□□□□□ -0.12
Stx1aO35526 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Stx1aO35526 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.32□□□□□ -0.12
Stx1aO35526 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Stx1aO35526 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Stx1aO35526 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Stx1aO35526 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.32□□□□□ -0.12
Stx1aO35526 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Stx1aO35526 Syt7-204ENSMUST00000223586 1344 ntBASIC14.32□□□□□ -0.12
Stx1aO35526 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Stx1aO35526 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Stx1aO35526 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Stx1aO35526 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Stx1aO35526 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Stx1aO35526 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Stx1aO35526 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Stx1aO35526 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Stx1aO35526 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Stx1aO35526 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Stx1aO35526 Gm1995-201ENSMUST00000220838 2602 ntBASIC14.31□□□□□ -0.12
Stx1aO35526 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Stx1aO35526 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Stx1aO35526 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Stx1aO35526 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Stx1aO35526 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Stx1aO35526 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Stx1aO35526 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Stx1aO35526 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Stx1aO35526 CT573086.2-201ENSMUST00000227277 4992 ntBASIC14.31□□□□□ -0.12
Stx1aO35526 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Stx1aO35526 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Stx1aO35526 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.31□□□□□ -0.12
Stx1aO35526 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Stx1aO35526 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.31□□□□□ -0.12
Stx1aO35526 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.31□□□□□ -0.12
Stx1aO35526 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Stx1aO35526 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.31□□□□□ -0.12
Stx1aO35526 Gm19220-201ENSMUST00000222682 803 ntBASIC14.31□□□□□ -0.12
Stx1aO35526 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Stx1aO35526 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Stx1aO35526 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Stx1aO35526 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Stx1aO35526 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Stx1aO35526 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Stx1aO35526 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.31□□□□□ -0.12
Stx1aO35526 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Stx1aO35526 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Stx1aO35526 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Stx1aO35526 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Stx1aO35526 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stx1aO35526 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stx1aO35526 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stx1aO35526 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stx1aO35526 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stx1aO35526 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stx1aO35526 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Stx1aO35526 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stx1aO35526 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Stx1aO35526 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Stx1aO35526 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Stx1aO35526 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stx1aO35526 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Stx1aO35526 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Stx1aO35526 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Stx1aO35526 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stx1aO35526 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Stx1aO35526 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stx1aO35526 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stx1aO35526 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.3□□□□□ -0.12
Stx1aO35526 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Stx1aO35526 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.3□□□□□ -0.12
Stx1aO35526 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Stx1aO35526 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.3□□□□□ -0.12
Stx1aO35526 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.3□□□□□ -0.12
Stx1aO35526 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stx1aO35526 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stx1aO35526 Gm16372-201ENSMUST00000073088 450 ntBASIC14.3□□□□□ -0.12
Stx1aO35526 Mir339-201ENSMUST00000083659 96 ntBASIC14.3□□□□□ -0.12
Stx1aO35526 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.3□□□□□ -0.12
Stx1aO35526 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stx1aO35526 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stx1aO35526 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.3□□□□□ -0.12
Stx1aO35526 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Stx1aO35526 Gm44806-201ENSMUST00000205574 2303 ntBASIC14.3□□□□□ -0.12
Stx1aO35526 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stx1aO35526 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms