Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Efnb3O35393 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Efnb3O35393 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Efnb3O35393 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Efnb3O35393 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC10.09□□□□□ -0.79
Efnb3O35393 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Efnb3O35393 Gm26464-201ENSMUST00000157094 305 ntBASIC10.09□□□□□ -0.79
Efnb3O35393 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Efnb3O35393 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Efnb3O35393 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.09□□□□□ -0.79
Efnb3O35393 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Efnb3O35393 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Efnb3O35393 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Efnb3O35393 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.09□□□□□ -0.79
Efnb3O35393 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Efnb3O35393 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC10.09□□□□□ -0.79
Efnb3O35393 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Efnb3O35393 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Efnb3O35393 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Efnb3O35393 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Efnb3O35393 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Efnb3O35393 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.09□□□□□ -0.79
Efnb3O35393 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.09□□□□□ -0.79
Efnb3O35393 Gm3365-201ENSMUST00000216296 1480 ntBASIC10.09□□□□□ -0.79
Efnb3O35393 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Efnb3O35393 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Efnb3O35393 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Efnb3O35393 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Efnb3O35393 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.09□□□□□ -0.79
Efnb3O35393 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Efnb3O35393 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Efnb3O35393 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Efnb3O35393 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Efnb3O35393 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Efnb3O35393 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Efnb3O35393 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Efnb3O35393 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Efnb3O35393 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Efnb3O35393 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Efnb3O35393 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Efnb3O35393 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.08□□□□□ -0.8
Efnb3O35393 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Efnb3O35393 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Efnb3O35393 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
Efnb3O35393 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.08□□□□□ -0.8
Efnb3O35393 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Efnb3O35393 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Efnb3O35393 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Efnb3O35393 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC10.08□□□□□ -0.8
Efnb3O35393 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Efnb3O35393 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC10.08□□□□□ -0.8
Efnb3O35393 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Efnb3O35393 Gm29667-201ENSMUST00000190817 490 ntBASIC10.08□□□□□ -0.8
Efnb3O35393 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.08□□□□□ -0.8
Efnb3O35393 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.08□□□□□ -0.8
Efnb3O35393 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.08□□□□□ -0.8
Efnb3O35393 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC10.08□□□□□ -0.8
Efnb3O35393 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.08□□□□□ -0.8
Efnb3O35393 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Efnb3O35393 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Efnb3O35393 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
Efnb3O35393 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Efnb3O35393 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Efnb3O35393 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.08□□□□□ -0.8
Efnb3O35393 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Efnb3O35393 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Efnb3O35393 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Efnb3O35393 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Efnb3O35393 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Efnb3O35393 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.08□□□□□ -0.8
Efnb3O35393 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Efnb3O35393 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
Efnb3O35393 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Efnb3O35393 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Efnb3O35393 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Efnb3O35393 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.07□□□□□ -0.8
Efnb3O35393 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.07□□□□□ -0.8
Efnb3O35393 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Efnb3O35393 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Efnb3O35393 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.07□□□□□ -0.8
Efnb3O35393 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.07□□□□□ -0.8
Efnb3O35393 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Efnb3O35393 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms