Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gm7730-201ENSMUST00000212486 454 ntBASIC11.39□□□□□ -0.59
Alx4O35137 Gm8227-201ENSMUST00000223306 571 ntBASIC11.39□□□□□ -0.59
Alx4O35137 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.39□□□□□ -0.59
Alx4O35137 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Alx4O35137 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Alx4O35137 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Alx4O35137 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.39□□□□□ -0.59
Alx4O35137 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Alx4O35137 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Alx4O35137 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Alx4O35137 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.39□□□□□ -0.59
Alx4O35137 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.39□□□□□ -0.59
Alx4O35137 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.39□□□□□ -0.59
Alx4O35137 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Alx4O35137 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Alx4O35137 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.38□□□□□ -0.59
Alx4O35137 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.38□□□□□ -0.59
Alx4O35137 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Alx4O35137 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Alx4O35137 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Alx4O35137 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Alx4O35137 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Alx4O35137 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Alx4O35137 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Alx4O35137 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Alx4O35137 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Alx4O35137 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Alx4O35137 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Alx4O35137 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.38□□□□□ -0.59
Alx4O35137 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Alx4O35137 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.38□□□□□ -0.59
Alx4O35137 Gm14760-201ENSMUST00000121831 999 ntBASIC11.38□□□□□ -0.59
Alx4O35137 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.38□□□□□ -0.59
Alx4O35137 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.38□□□□□ -0.59
Alx4O35137 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.38□□□□□ -0.59
Alx4O35137 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.38□□□□□ -0.59
Alx4O35137 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.38□□□□□ -0.59
Alx4O35137 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.38□□□□□ -0.59
Alx4O35137 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Alx4O35137 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Alx4O35137 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Alx4O35137 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Alx4O35137 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Alx4O35137 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Alx4O35137 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Alx4O35137 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Alx4O35137 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Alx4O35137 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Alx4O35137 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Alx4O35137 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.38□□□□□ -0.59
Alx4O35137 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.38□□□□□ -0.59
Alx4O35137 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Alx4O35137 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Alx4O35137 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Alx4O35137 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Alx4O35137 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Alx4O35137 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Alx4O35137 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Alx4O35137 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Alx4O35137 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Alx4O35137 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Alx4O35137 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Alx4O35137 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Alx4O35137 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Alx4O35137 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Alx4O35137 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Alx4O35137 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Alx4O35137 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Alx4O35137 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Alx4O35137 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Alx4O35137 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Alx4O35137 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Alx4O35137 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Alx4O35137 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Alx4O35137 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.37□□□□□ -0.59
Alx4O35137 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Alx4O35137 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Alx4O35137 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Alx4O35137 Gm28693-202ENSMUST00000190758 331 ntBASIC11.37□□□□□ -0.59
Alx4O35137 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.37□□□□□ -0.59
Alx4O35137 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.37□□□□□ -0.59
Alx4O35137 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.37□□□□□ -0.59
Alx4O35137 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Alx4O35137 Gm18307-201ENSMUST00000206864 949 ntBASIC11.37□□□□□ -0.59
Alx4O35137 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Alx4O35137 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.37□□□□□ -0.59
Alx4O35137 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Alx4O35137 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Alx4O35137 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Alx4O35137 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Alx4O35137 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Alx4O35137 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Alx4O35137 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Alx4O35137 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Alx4O35137 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Alx4O35137 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Alx4O35137 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Alx4O35137 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Alx4O35137 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Alx4O35137 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms