Protein–RNA interactions for Protein: J3QMH4

Gm21866, Predicted gene, 21866, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21866J3QMH4 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Gm27430-201ENSMUST00000184585 107 ntBASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Gm44333-201ENSMUST00000197168 107 ntBASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Gm42550-201ENSMUST00000201553 960 ntBASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.43□□□□□ -0.58
Gm21866J3QMH4 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm21866J3QMH4 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.42□□□□□ -0.58
Gm21866J3QMH4 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Gm27618-201ENSMUST00000183671 60 ntBASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm21866J3QMH4 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gm21866J3QMH4 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm21866J3QMH4 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms