Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh9F8VPK8 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Gm10156-201ENSMUST00000122364 462 ntBASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Gm7063-201ENSMUST00000186840 981 ntBASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh9F8VPK8 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Gm8805-201ENSMUST00000117848 313 ntBASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Gm22121-201ENSMUST00000175148 54 ntBASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Gm37922-201ENSMUST00000195596 455 ntBASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Gm19184-201ENSMUST00000196798 928 ntBASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Gm8099-201ENSMUST00000200510 742 ntBASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Gm7287-201ENSMUST00000205267 602 ntBASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms