Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh1F7BJK1 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh1F7BJK1 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh1F7BJK1 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Gm15321-201ENSMUST00000121290 288 ntBASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Gm7063-201ENSMUST00000186840 981 ntBASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Gm44069-201ENSMUST00000204898 506 ntBASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh1F7BJK1 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Auts2-212ENSMUST00000178555 309 ntBASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh1F7BJK1 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Gm15371-201ENSMUST00000117057 784 ntBASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Gm16215-201ENSMUST00000161990 637 ntBASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Mir6977-201ENSMUST00000184960 64 ntBASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms