Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 Gm25076-201ENSMUST00000104098 132 ntBASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 Gm24791-201ENSMUST00000104284 131 ntBASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 Gm12030-201ENSMUST00000121917 223 ntBASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 Gm8737-201ENSMUST00000122208 642 ntBASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 Olfr692-202ENSMUST00000217827 1126 ntBASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 AC154361.2-201ENSMUST00000224747 943 ntBASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc188F6WEU2 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.77□□□□□ -0.36
Ccdc188F6WEU2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc188F6WEU2 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.77□□□□□ -0.36
Ccdc188F6WEU2 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc188F6WEU2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc188F6WEU2 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc188F6WEU2 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccdc188F6WEU2 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ccdc188F6WEU2 Gm12291-201ENSMUST00000121627 311 ntBASIC12.77□□□□□ -0.37
Ccdc188F6WEU2 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Ccdc188F6WEU2 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc188F6WEU2 Gm4654-201ENSMUST00000183305 982 ntBASIC12.77□□□□□ -0.37
Ccdc188F6WEU2 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc188F6WEU2 Gm37458-201ENSMUST00000194055 410 ntBASIC12.77□□□□□ -0.37
Ccdc188F6WEU2 Gm42433-201ENSMUST00000196806 940 ntBASIC12.77□□□□□ -0.37
Ccdc188F6WEU2 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc188F6WEU2 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.77□□□□□ -0.37
Ccdc188F6WEU2 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccdc188F6WEU2 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccdc188F6WEU2 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc188F6WEU2 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc188F6WEU2 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ccdc188F6WEU2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc188F6WEU2 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc188F6WEU2 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc188F6WEU2 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc188F6WEU2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ccdc188F6WEU2 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ccdc188F6WEU2 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc188F6WEU2 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccdc188F6WEU2 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Gm13286-201ENSMUST00000117750 537 ntBASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Gm11578-201ENSMUST00000118530 459 ntBASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Gm9166-201ENSMUST00000120293 561 ntBASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Gm22146-201ENSMUST00000157397 288 ntBASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Mir6973a-201ENSMUST00000183646 78 ntBASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Mir6941-201ENSMUST00000184711 59 ntBASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Ighv1-2-201ENSMUST00000195325 378 ntBASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 AC164087.2-201ENSMUST00000216206 1072 ntBASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms