Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 AC132901.1-201ENSMUST00000224345 508 ntBASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Syngap1F6SEU4 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Syngap1F6SEU4 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Syngap1F6SEU4 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Syngap1F6SEU4 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Gm8738-201ENSMUST00000172606 329 ntBASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Gm6458-201ENSMUST00000211573 635 ntBASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syngap1F6SEU4 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Syngap1F6SEU4 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syngap1F6SEU4 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC14.32□□□□□ -0.12
Syngap1F6SEU4 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syngap1F6SEU4 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syngap1F6SEU4 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syngap1F6SEU4 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Syngap1F6SEU4 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Syngap1F6SEU4 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Syngap1F6SEU4 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syngap1F6SEU4 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syngap1F6SEU4 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syngap1F6SEU4 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syngap1F6SEU4 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Syngap1F6SEU4 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syngap1F6SEU4 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syngap1F6SEU4 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syngap1F6SEU4 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Syngap1F6SEU4 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Syngap1F6SEU4 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Syngap1F6SEU4 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Syngap1F6SEU4 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Syngap1F6SEU4 Gm23270-201ENSMUST00000104055 131 ntBASIC14.32□□□□□ -0.12
Syngap1F6SEU4 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.32□□□□□ -0.12
Syngap1F6SEU4 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms