Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Gm24830-201ENSMUST00000102024 166 ntBASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Gm23270-201ENSMUST00000104055 131 ntBASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Gm12058-201ENSMUST00000118614 437 ntBASIC12.59□□□□□ -0.39
Srp54bE9PXC0 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Gm25890-201ENSMUST00000177643 165 ntBASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Gm22614-201ENSMUST00000178300 165 ntBASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Gm18827-201ENSMUST00000188341 790 ntBASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Gm45925-201ENSMUST00000218882 744 ntBASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Gm22042-201ENSMUST00000082989 165 ntBASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Gm26232-201ENSMUST00000083360 166 ntBASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Gm24136-201ENSMUST00000083374 165 ntBASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Mir339-201ENSMUST00000083659 96 ntBASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Gm26110-201ENSMUST00000083971 165 ntBASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Srp54bE9PXC0 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.58□□□□□ -0.39
Srp54bE9PXC0 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.58□□□□□ -0.4
Srp54bE9PXC0 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.58□□□□□ -0.4
Srp54bE9PXC0 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srp54bE9PXC0 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srp54bE9PXC0 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Srp54bE9PXC0 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srp54bE9PXC0 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srp54bE9PXC0 Gm25214-201ENSMUST00000104573 129 ntBASIC12.58□□□□□ -0.4
Srp54bE9PXC0 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srp54bE9PXC0 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srp54bE9PXC0 Gm13875-201ENSMUST00000120162 282 ntBASIC12.58□□□□□ -0.4
Srp54bE9PXC0 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Srp54bE9PXC0 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.58□□□□□ -0.4
Srp54bE9PXC0 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srp54bE9PXC0 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.58□□□□□ -0.4
Srp54bE9PXC0 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.58□□□□□ -0.4
Srp54bE9PXC0 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.58□□□□□ -0.4
Srp54bE9PXC0 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.58□□□□□ -0.4
Srp54bE9PXC0 Gm44405-201ENSMUST00000198952 126 ntBASIC12.58□□□□□ -0.4
Srp54bE9PXC0 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.58□□□□□ -0.4
Srp54bE9PXC0 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.58□□□□□ -0.4
Srp54bE9PXC0 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Srp54bE9PXC0 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.58□□□□□ -0.4
Srp54bE9PXC0 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srp54bE9PXC0 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Srp54bE9PXC0 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Srp54bE9PXC0 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srp54bE9PXC0 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srp54bE9PXC0 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srp54bE9PXC0 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Srp54bE9PXC0 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srp54bE9PXC0 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.58□□□□□ -0.4
Srp54bE9PXC0 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srp54bE9PXC0 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srp54bE9PXC0 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.57□□□□□ -0.4
Srp54bE9PXC0 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms