Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Col4a6B1AVK5 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col4a6B1AVK5 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col4a6B1AVK5 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.85□□□□□ -0.35
Col4a6B1AVK5 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Col4a6B1AVK5 Mir1956-201ENSMUST00000157748 65 ntBASIC12.85□□□□□ -0.35
Col4a6B1AVK5 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
Col4a6B1AVK5 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.85□□□□□ -0.35
Col4a6B1AVK5 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col4a6B1AVK5 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.85□□□□□ -0.35
Col4a6B1AVK5 Gm8492-201ENSMUST00000182375 987 ntBASIC12.85□□□□□ -0.35
Col4a6B1AVK5 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col4a6B1AVK5 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col4a6B1AVK5 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col4a6B1AVK5 Gm25517-201ENSMUST00000083865 134 ntBASIC12.85□□□□□ -0.35
Col4a6B1AVK5 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col4a6B1AVK5 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col4a6B1AVK5 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col4a6B1AVK5 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col4a6B1AVK5 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Gm8731-201ENSMUST00000118088 412 ntBASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Gm4726-201ENSMUST00000135604 736 ntBASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Gm6019-201ENSMUST00000148369 736 ntBASIC12.84□□□□□ -0.35
Col4a6B1AVK5 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Col4a6B1AVK5 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Col4a6B1AVK5 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Col4a6B1AVK5 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col4a6B1AVK5 Gm13263-201ENSMUST00000121271 838 ntBASIC12.83□□□□□ -0.35
Col4a6B1AVK5 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col4a6B1AVK5 Gm9132-201ENSMUST00000210182 832 ntBASIC12.83□□□□□ -0.35
Col4a6B1AVK5 Gm2517-201ENSMUST00000215651 348 ntBASIC12.83□□□□□ -0.35
Col4a6B1AVK5 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.83□□□□□ -0.35
Col4a6B1AVK5 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col4a6B1AVK5 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col4a6B1AVK5 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col4a6B1AVK5 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col4a6B1AVK5 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col4a6B1AVK5 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col4a6B1AVK5 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col4a6B1AVK5 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Col4a6B1AVK5 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col4a6B1AVK5 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col4a6B1AVK5 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Col4a6B1AVK5 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Col4a6B1AVK5 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col4a6B1AVK5 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Col4a6B1AVK5 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col4a6B1AVK5 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Col4a6B1AVK5 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Col4a6B1AVK5 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col4a6B1AVK5 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col4a6B1AVK5 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Col4a6B1AVK5 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.83□□□□□ -0.36
Col4a6B1AVK5 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Col4a6B1AVK5 Gm11340-201ENSMUST00000119226 412 ntBASIC12.83□□□□□ -0.36
Col4a6B1AVK5 Gm16071-201ENSMUST00000119589 793 ntBASIC12.83□□□□□ -0.36
Col4a6B1AVK5 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC12.83□□□□□ -0.36
Col4a6B1AVK5 Gm25951-201ENSMUST00000175330 64 ntBASIC12.83□□□□□ -0.36
Col4a6B1AVK5 Gm17826-201ENSMUST00000189720 798 ntBASIC12.83□□□□□ -0.36
Col4a6B1AVK5 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col4a6B1AVK5 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Col4a6B1AVK5 Gm8956-201ENSMUST00000203939 825 ntBASIC12.83□□□□□ -0.36
Col4a6B1AVK5 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col4a6B1AVK5 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col4a6B1AVK5 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
Col4a6B1AVK5 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col4a6B1AVK5 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a6B1AVK5 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a6B1AVK5 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms