Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.76□□□□□ -0.69
Col6a4A2AX52 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.76□□□□□ -0.69
Col6a4A2AX52 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.76□□□□□ -0.69
Col6a4A2AX52 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.76□□□□□ -0.69
Col6a4A2AX52 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a4A2AX52 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a4A2AX52 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.75□□□□□ -0.69
Col6a4A2AX52 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Col6a4A2AX52 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.75□□□□□ -0.69
Col6a4A2AX52 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Gm10312-201ENSMUST00000078515 489 ntBASIC10.75□□□□□ -0.69
Col6a4A2AX52 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a4A2AX52 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC10.74□□□□□ -0.69
Col6a4A2AX52 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a4A2AX52 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC10.74□□□□□ -0.69
Col6a4A2AX52 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a4A2AX52 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Gm5904-201ENSMUST00000210286 865 ntBASIC10.74□□□□□ -0.69
Col6a4A2AX52 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Gm3028-201ENSMUST00000213805 1119 ntBASIC10.74□□□□□ -0.69
Col6a4A2AX52 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms