Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.1□□□□□ -0.15
Scn3aA2ASI5 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn3aA2ASI5 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn3aA2ASI5 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Scn3aA2ASI5 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Scn3aA2ASI5 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn3aA2ASI5 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.1□□□□□ -0.15
Scn3aA2ASI5 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn3aA2ASI5 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Gm18304-201ENSMUST00000189162 546 ntBASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Gm43962-201ENSMUST00000203898 190 ntBASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Gm11989-201ENSMUST00000117240 672 ntBASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Gm11362-201ENSMUST00000118838 850 ntBASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Gm17040-202ENSMUST00000170597 889 ntBASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Gm19187-201ENSMUST00000206781 892 ntBASIC14.09□□□□□ -0.15
Scn3aA2ASI5 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn3aA2ASI5 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scn3aA2ASI5 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scn3aA2ASI5 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scn3aA2ASI5 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scn3aA2ASI5 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Scn3aA2ASI5 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.08□□□□□ -0.16
Scn3aA2ASI5 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn3aA2ASI5 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn3aA2ASI5 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.08□□□□□ -0.16
Scn3aA2ASI5 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Scn3aA2ASI5 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scn3aA2ASI5 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.08□□□□□ -0.16
Scn3aA2ASI5 Gm27552-201ENSMUST00000183351 62 ntBASIC14.08□□□□□ -0.16
Scn3aA2ASI5 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scn3aA2ASI5 Gm27844-201ENSMUST00000183613 62 ntBASIC14.08□□□□□ -0.16
Scn3aA2ASI5 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.08□□□□□ -0.16
Scn3aA2ASI5 Gm17827-201ENSMUST00000211825 742 ntBASIC14.08□□□□□ -0.16
Scn3aA2ASI5 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn3aA2ASI5 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scn3aA2ASI5 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scn3aA2ASI5 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn3aA2ASI5 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn3aA2ASI5 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn3aA2ASI5 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scn3aA2ASI5 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn3aA2ASI5 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn3aA2ASI5 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn3aA2ASI5 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn3aA2ASI5 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn3aA2ASI5 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn3aA2ASI5 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn3aA2ASI5 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 AC131330.1-201ENSMUST00000227814 1015 ntBASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.07□□□□□ -0.16
Scn3aA2ASI5 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms