Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn1aA2APX8 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1aA2APX8 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.29□□□□□ -0.28
Scn1aA2APX8 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1aA2APX8 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.29□□□□□ -0.28
Scn1aA2APX8 Gm26035-201ENSMUST00000083065 308 ntBASIC13.29□□□□□ -0.28
Scn1aA2APX8 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1aA2APX8 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.29□□□□□ -0.28
Scn1aA2APX8 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1aA2APX8 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.29□□□□□ -0.28
Scn1aA2APX8 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1aA2APX8 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.29□□□□□ -0.28
Scn1aA2APX8 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.29□□□□□ -0.28
Scn1aA2APX8 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Scn1aA2APX8 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1aA2APX8 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1aA2APX8 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1aA2APX8 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1aA2APX8 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
Scn1aA2APX8 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1aA2APX8 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1aA2APX8 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Scn1aA2APX8 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1aA2APX8 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1aA2APX8 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.28□□□□□ -0.28
Scn1aA2APX8 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1aA2APX8 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Scn1aA2APX8 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1aA2APX8 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1aA2APX8 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1aA2APX8 Gm6963-201ENSMUST00000147879 379 ntBASIC13.28□□□□□ -0.28
Scn1aA2APX8 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
Scn1aA2APX8 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1aA2APX8 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1aA2APX8 AA914427-201ENSMUST00000193194 1166 ntBASIC13.28□□□□□ -0.28
Scn1aA2APX8 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.28□□□□□ -0.28
Scn1aA2APX8 Gm8712-201ENSMUST00000221090 701 ntBASIC13.28□□□□□ -0.28
Scn1aA2APX8 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.28□□□□□ -0.28
Scn1aA2APX8 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Scn1aA2APX8 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.28□□□□□ -0.28
Scn1aA2APX8 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1aA2APX8 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1aA2APX8 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1aA2APX8 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Scn1aA2APX8 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1aA2APX8 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1aA2APX8 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn1aA2APX8 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn1aA2APX8 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn1aA2APX8 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn1aA2APX8 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn1aA2APX8 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.27□□□□□ -0.28
Scn1aA2APX8 Gm14760-201ENSMUST00000121831 999 ntBASIC13.27□□□□□ -0.28
Scn1aA2APX8 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.27□□□□□ -0.28
Scn1aA2APX8 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Scn1aA2APX8 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.27□□□□□ -0.28
Scn1aA2APX8 Gm15276-201ENSMUST00000145953 498 ntBASIC13.27□□□□□ -0.28
Scn1aA2APX8 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn1aA2APX8 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.27□□□□□ -0.28
Scn1aA2APX8 Gm45186-201ENSMUST00000206874 478 ntBASIC13.27□□□□□ -0.28
Scn1aA2APX8 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn1aA2APX8 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn1aA2APX8 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms