Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.18□□□□□ -0.3
Speer3W4VSP1 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Speer3W4VSP1 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Speer3W4VSP1 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Speer3W4VSP1 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.18□□□□□ -0.3
Speer3W4VSP1 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Speer3W4VSP1 Gm12485-201ENSMUST00000119641 291 ntBASIC13.18□□□□□ -0.3
Speer3W4VSP1 Gm15061-201ENSMUST00000121076 1046 ntBASIC13.18□□□□□ -0.3
Speer3W4VSP1 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.18□□□□□ -0.3
Speer3W4VSP1 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Speer3W4VSP1 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Speer3W4VSP1 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Speer3W4VSP1 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Speer3W4VSP1 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC13.18□□□□□ -0.3
Speer3W4VSP1 AC159205.7-201ENSMUST00000225988 692 ntBASIC13.18□□□□□ -0.3
Speer3W4VSP1 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Speer3W4VSP1 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Speer3W4VSP1 BC043934-202ENSMUST00000185694 2356 ntBASIC13.18□□□□□ -0.3
Speer3W4VSP1 AC136019.1-201ENSMUST00000226503 1412 ntBASIC13.18□□□□□ -0.3
Speer3W4VSP1 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Speer3W4VSP1 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Speer3W4VSP1 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Speer3W4VSP1 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Speer3W4VSP1 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Speer3W4VSP1 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Speer3W4VSP1 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Speer3W4VSP1 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Speer3W4VSP1 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Speer3W4VSP1 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Speer3W4VSP1 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Speer3W4VSP1 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Speer3W4VSP1 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC13.18□□□□□ -0.3
Speer3W4VSP1 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.17□□□□□ -0.3
Speer3W4VSP1 Gm42995-201ENSMUST00000197047 1330 ntBASIC13.17□□□□□ -0.3
Speer3W4VSP1 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Matn2-203ENSMUST00000226766 3252 ntBASIC13.17□□□□□ -0.3
Speer3W4VSP1 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.17□□□□□ -0.3
Speer3W4VSP1 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Olfr362-201ENSMUST00000100144 954 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.17□□□□□ -0.3
Speer3W4VSP1 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Gm26474-201ENSMUST00000116762 122 ntBASIC13.17□□□□□ -0.3
Speer3W4VSP1 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Speer3W4VSP1 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Gm5866-201ENSMUST00000177881 973 ntBASIC13.17□□□□□ -0.3
Speer3W4VSP1 Gm27437-201ENSMUST00000183429 107 ntBASIC13.17□□□□□ -0.3
Speer3W4VSP1 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Gm29288-201ENSMUST00000191582 901 ntBASIC13.17□□□□□ -0.3
Speer3W4VSP1 Gm42516-201ENSMUST00000198691 767 ntBASIC13.17□□□□□ -0.3
Speer3W4VSP1 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.17□□□□□ -0.3
Speer3W4VSP1 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Speer3W4VSP1 CT025525.1-201ENSMUST00000226325 1054 ntBASIC13.17□□□□□ -0.3
Speer3W4VSP1 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Speer3W4VSP1 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.17□□□□□ -0.3
Speer3W4VSP1 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.17□□□□□ -0.3
Speer3W4VSP1 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Speer3W4VSP1 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Speer3W4VSP1 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Speer3W4VSP1 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.16□□□□□ -0.3
Speer3W4VSP1 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Speer3W4VSP1 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Speer3W4VSP1 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Speer3W4VSP1 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Speer3W4VSP1 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Speer3W4VSP1 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Speer3W4VSP1 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Speer3W4VSP1 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Speer3W4VSP1 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.16□□□□□ -0.3
Speer3W4VSP1 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Speer3W4VSP1 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Speer3W4VSP1 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms