Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Lhx9Q9WUH2 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Lhx9Q9WUH2 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.15□□□□□ -0.46
Lhx9Q9WUH2 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx9Q9WUH2 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx9Q9WUH2 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Lhx9Q9WUH2 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx9Q9WUH2 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx9Q9WUH2 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lhx9Q9WUH2 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.47
Lhx9Q9WUH2 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Gm10434-201ENSMUST00000101158 471 ntBASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Gm20482-202ENSMUST00000174729 825 ntBASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Morn2-202ENSMUST00000227729 656 ntBASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx9Q9WUH2 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Gm11222-201ENSMUST00000119005 738 ntBASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx9Q9WUH2 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms