Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cdh17Q9R100 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh17Q9R100 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh17Q9R100 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh17Q9R100 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh17Q9R100 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cdh17Q9R100 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh17Q9R100 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh17Q9R100 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh17Q9R100 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh17Q9R100 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh17Q9R100 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh17Q9R100 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh17Q9R100 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh17Q9R100 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh17Q9R100 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh17Q9R100 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh17Q9R100 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cdh17Q9R100 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh17Q9R100 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cdh17Q9R100 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh17Q9R100 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh17Q9R100 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh17Q9R100 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cdh17Q9R100 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh17Q9R100 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.43□□□□□ -0.42
Cdh17Q9R100 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh17Q9R100 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh17Q9R100 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cdh17Q9R100 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.43□□□□□ -0.42
Cdh17Q9R100 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.43□□□□□ -0.42
Cdh17Q9R100 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Cdh17Q9R100 Gm11637-201ENSMUST00000120601 592 ntBASIC12.43□□□□□ -0.42
Cdh17Q9R100 Gm12091-201ENSMUST00000146791 830 ntBASIC12.43□□□□□ -0.42
Cdh17Q9R100 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cdh17Q9R100 Gm23363-201ENSMUST00000175024 79 ntBASIC12.43□□□□□ -0.42
Cdh17Q9R100 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh17Q9R100 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.43□□□□□ -0.42
Cdh17Q9R100 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.43□□□□□ -0.42
Cdh17Q9R100 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh17Q9R100 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.43□□□□□ -0.42
Cdh17Q9R100 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.43□□□□□ -0.42
Cdh17Q9R100 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.43□□□□□ -0.42
Cdh17Q9R100 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.43□□□□□ -0.42
Cdh17Q9R100 Gm37042-201ENSMUST00000193816 581 ntBASIC12.43□□□□□ -0.42
Cdh17Q9R100 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdh17Q9R100 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.43□□□□□ -0.42
Cdh17Q9R100 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh17Q9R100 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh17Q9R100 Rubie-203ENSMUST00000227803 2430 ntBASIC12.43□□□□□ -0.42
Cdh17Q9R100 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh17Q9R100 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh17Q9R100 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh17Q9R100 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh17Q9R100 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh17Q9R100 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh17Q9R100 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh17Q9R100 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Gm8810-201ENSMUST00000172895 754 ntBASIC12.42□□□□□ -0.42
Cdh17Q9R100 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Gm10576-201ENSMUST00000191927 825 ntBASIC12.42□□□□□ -0.42
Cdh17Q9R100 Gm8515-201ENSMUST00000194852 576 ntBASIC12.42□□□□□ -0.42
Cdh17Q9R100 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Gm45384-201ENSMUST00000210451 277 ntBASIC12.42□□□□□ -0.42
Cdh17Q9R100 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Gm6180-201ENSMUST00000065243 498 ntBASIC12.42□□□□□ -0.42
Cdh17Q9R100 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Matn2-203ENSMUST00000226766 3252 ntBASIC12.42□□□□□ -0.42
Cdh17Q9R100 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.42□□□□□ -0.42
Cdh17Q9R100 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh17Q9R100 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Cdh17Q9R100 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh17Q9R100 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms