Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Gm15991-202ENSMUST00000212123 3565 ntBASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Gm11637-201ENSMUST00000120601 592 ntBASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Gm27892-201ENSMUST00000185017 106 ntBASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Gm5356-201ENSMUST00000093326 615 ntBASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gtf3c6Q9D8P7 Gm6124-201ENSMUST00000188240 2580 ntBASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Gm11814-201ENSMUST00000119515 929 ntBASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Gm15806-201ENSMUST00000120696 955 ntBASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Gm8810-201ENSMUST00000172895 754 ntBASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Gm37497-201ENSMUST00000195830 798 ntBASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.78□□□□□ -0.2
Gtf3c6Q9D8P7 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Gtf3c6Q9D8P7 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Gtf3c6Q9D8P7 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Gtf3c6Q9D8P7 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Gtf3c6Q9D8P7 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Gtf3c6Q9D8P7 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Gtf3c6Q9D8P7 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Gtf3c6Q9D8P7 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Gtf3c6Q9D8P7 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Gtf3c6Q9D8P7 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gtf3c6Q9D8P7 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Gtf3c6Q9D8P7 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms