Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC15.23■□□□□ 0.03
Stag1Q9D3E6 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Stag1Q9D3E6 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Stag1Q9D3E6 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Stag1Q9D3E6 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Stag1Q9D3E6 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Gm2673-201ENSMUST00000120958 1608 ntBASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Gm14109-201ENSMUST00000118814 309 ntBASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Gm13570-201ENSMUST00000140763 309 ntBASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Gm24990-201ENSMUST00000157406 323 ntBASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Gm8018-201ENSMUST00000173536 789 ntBASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Gm37201-201ENSMUST00000191845 523 ntBASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Gm43068-201ENSMUST00000201095 1273 ntBASIC15.22■□□□□ 0.03
Stag1Q9D3E6 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC15.22■□□□□ 0.03
Stag1Q9D3E6 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 Gm44094-201ENSMUST00000204703 2030 ntBASIC15.21■□□□□ 0.03
Stag1Q9D3E6 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 Gm18212-201ENSMUST00000211678 889 ntBASIC15.21■□□□□ 0.03
Stag1Q9D3E6 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 AC161537.1-201ENSMUST00000226199 1015 ntBASIC15.21■□□□□ 0.03
Stag1Q9D3E6 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Stag1Q9D3E6 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Stag1Q9D3E6 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Stag1Q9D3E6 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Stag1Q9D3E6 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Stag1Q9D3E6 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Stag1Q9D3E6 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Stag1Q9D3E6 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Stag1Q9D3E6 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Stag1Q9D3E6 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Stag1Q9D3E6 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC15.2■□□□□ 0.02
Stag1Q9D3E6 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Stag1Q9D3E6 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Stag1Q9D3E6 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Stag1Q9D3E6 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Stag1Q9D3E6 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Stag1Q9D3E6 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Stag1Q9D3E6 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Stag1Q9D3E6 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Stag1Q9D3E6 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Stag1Q9D3E6 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Stag1Q9D3E6 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Stag1Q9D3E6 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms