Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Gm13223-201ENSMUST00000118609 747 ntBASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim13Q9CYB0 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim13Q9CYB0 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim13Q9CYB0 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim13Q9CYB0 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim13Q9CYB0 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim13Q9CYB0 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.81□□□□□ -0.52
Trim13Q9CYB0 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim13Q9CYB0 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Trim13Q9CYB0 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.81□□□□□ -0.52
Trim13Q9CYB0 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim13Q9CYB0 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim13Q9CYB0 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim13Q9CYB0 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim13Q9CYB0 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim13Q9CYB0 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.81□□□□□ -0.52
Trim13Q9CYB0 Gm13453-201ENSMUST00000118708 357 ntBASIC11.81□□□□□ -0.52
Trim13Q9CYB0 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.81□□□□□ -0.52
Trim13Q9CYB0 Gm27306-201ENSMUST00000183970 107 ntBASIC11.81□□□□□ -0.52
Trim13Q9CYB0 Gm17837-201ENSMUST00000186435 985 ntBASIC11.81□□□□□ -0.52
Trim13Q9CYB0 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim13Q9CYB0 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.81□□□□□ -0.52
Trim13Q9CYB0 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim13Q9CYB0 Gm9063-201ENSMUST00000223299 582 ntBASIC11.81□□□□□ -0.52
Trim13Q9CYB0 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trim13Q9CYB0 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim13Q9CYB0 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim13Q9CYB0 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim13Q9CYB0 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim13Q9CYB0 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim13Q9CYB0 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.81□□□□□ -0.52
Trim13Q9CYB0 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim13Q9CYB0 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trim13Q9CYB0 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim13Q9CYB0 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim13Q9CYB0 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim13Q9CYB0 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim13Q9CYB0 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim13Q9CYB0 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim13Q9CYB0 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim13Q9CYB0 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim13Q9CYB0 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.8□□□□□ -0.52
Trim13Q9CYB0 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim13Q9CYB0 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim13Q9CYB0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim13Q9CYB0 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim13Q9CYB0 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.8□□□□□ -0.52
Trim13Q9CYB0 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim13Q9CYB0 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim13Q9CYB0 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Trim13Q9CYB0 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
Trim13Q9CYB0 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim13Q9CYB0 Mir7023-201ENSMUST00000185093 64 ntBASIC11.8□□□□□ -0.52
Trim13Q9CYB0 Gm29608-201ENSMUST00000190444 463 ntBASIC11.8□□□□□ -0.52
Trim13Q9CYB0 Gm43094-201ENSMUST00000196549 921 ntBASIC11.8□□□□□ -0.52
Trim13Q9CYB0 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms