Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.67□□□□□ -0.38
Ssu72Q9CY97 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssu72Q9CY97 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Map1b-203ENSMUST00000223725 2669 ntBASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Gm26308-201ENSMUST00000157768 69 ntBASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.66□□□□□ -0.38
Ssu72Q9CY97 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Gm16372-201ENSMUST00000073088 450 ntBASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ssu72Q9CY97 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.65□□□□□ -0.38
Ssu72Q9CY97 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Gm15487-201ENSMUST00000122373 465 ntBASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 804.1 ms