Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cldnd1Q9CQX5 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cldnd1Q9CQX5 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cldnd1Q9CQX5 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.02□□□□□ -0.33
Cldnd1Q9CQX5 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cldnd1Q9CQX5 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cldnd1Q9CQX5 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cldnd1Q9CQX5 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cldnd1Q9CQX5 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Cldnd1Q9CQX5 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cldnd1Q9CQX5 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.02□□□□□ -0.33
Cldnd1Q9CQX5 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Gm12314-201ENSMUST00000118104 538 ntBASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Gm18038-201ENSMUST00000197900 485 ntBASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Gm19287-201ENSMUST00000203190 358 ntBASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd1Q9CQX5 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 AC133602.1-201ENSMUST00000227510 509 ntBASIC13□□□□□ -0.33
Cldnd1Q9CQX5 CT030637.1-201ENSMUST00000228016 669 ntBASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cldnd1Q9CQX5 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cldnd1Q9CQX5 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldnd1Q9CQX5 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms