Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm5628-201ENSMUST00000222318 1049 ntBASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Dupd1-202ENSMUST00000224735 548 ntBASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 AC131586.3-201ENSMUST00000228355 1367 ntBASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.37□□□□□ -0.75
RTRAFQ9CQE8 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Gm6912-201ENSMUST00000117218 544 ntBASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Gm15460-201ENSMUST00000118147 391 ntBASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 AC153872.1-201ENSMUST00000199539 128 ntBASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Gm45612-201ENSMUST00000211320 160 ntBASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Map1b-203ENSMUST00000223725 2669 ntBASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
RTRAFQ9CQE8 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms