Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Gm16215-201ENSMUST00000161990 637 ntBASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Gm42550-201ENSMUST00000201553 960 ntBASIC12.1□□□□□ -0.47
Ska1Q9CPV1 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ska1Q9CPV1 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.1□□□□□ -0.47
Ska1Q9CPV1 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Gm38223-201ENSMUST00000194484 695 ntBASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.09□□□□□ -0.47
Ska1Q9CPV1 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ska1Q9CPV1 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.08□□□□□ -0.47
Ska1Q9CPV1 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Ska1Q9CPV1 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Gm42612-201ENSMUST00000197986 623 ntBASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Gm43170-201ENSMUST00000199827 612 ntBASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms