Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim11Q99PQ2 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Gm15806-201ENSMUST00000120696 955 ntBASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Gm8099-201ENSMUST00000200510 742 ntBASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Gm9794-201ENSMUST00000202370 423 ntBASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim11Q99PQ2 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim11Q99PQ2 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.55□□□□□ -0.08
Trim11Q99PQ2 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim11Q99PQ2 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim11Q99PQ2 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim11Q99PQ2 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim11Q99PQ2 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim11Q99PQ2 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim11Q99PQ2 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim11Q99PQ2 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trim11Q99PQ2 Gm13369-201ENSMUST00000119442 987 ntBASIC14.55□□□□□ -0.08
Trim11Q99PQ2 Gm19891-201ENSMUST00000189771 303 ntBASIC14.55□□□□□ -0.08
Trim11Q99PQ2 Gm37042-201ENSMUST00000193816 581 ntBASIC14.55□□□□□ -0.08
Trim11Q99PQ2 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.55□□□□□ -0.08
Trim11Q99PQ2 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.55□□□□□ -0.08
Trim11Q99PQ2 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim11Q99PQ2 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.55□□□□□ -0.08
Trim11Q99PQ2 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim11Q99PQ2 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trim11Q99PQ2 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trim11Q99PQ2 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Trim11Q99PQ2 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim11Q99PQ2 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim11Q99PQ2 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim11Q99PQ2 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim11Q99PQ2 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim11Q99PQ2 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim11Q99PQ2 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trim11Q99PQ2 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
Trim11Q99PQ2 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim11Q99PQ2 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim11Q99PQ2 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim11Q99PQ2 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim11Q99PQ2 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trim11Q99PQ2 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trim11Q99PQ2 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim11Q99PQ2 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim11Q99PQ2 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.54□□□□□ -0.08
Trim11Q99PQ2 Gm23363-201ENSMUST00000175024 79 ntBASIC14.54□□□□□ -0.08
Trim11Q99PQ2 Gm22121-201ENSMUST00000175148 54 ntBASIC14.54□□□□□ -0.08
Trim11Q99PQ2 Gm8652-201ENSMUST00000181363 964 ntBASIC14.54□□□□□ -0.08
Trim11Q99PQ2 Gm27486-201ENSMUST00000184923 80 ntBASIC14.54□□□□□ -0.08
Trim11Q99PQ2 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim11Q99PQ2 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.54□□□□□ -0.08
Trim11Q99PQ2 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim11Q99PQ2 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trim11Q99PQ2 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.54□□□□□ -0.08
Trim11Q99PQ2 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim11Q99PQ2 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim11Q99PQ2 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim11Q99PQ2 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim11Q99PQ2 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms