Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm27663-201ENSMUST00000184839 110 ntBASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim8Q99PJ2 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.53□□□□□ -0.4
Trim8Q99PJ2 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Gm37648-201ENSMUST00000192072 2563 ntBASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim8Q99PJ2 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim8Q99PJ2 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim8Q99PJ2 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim8Q99PJ2 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Trim8Q99PJ2 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.52□□□□□ -0.4
Trim8Q99PJ2 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim8Q99PJ2 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim8Q99PJ2 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim8Q99PJ2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trim8Q99PJ2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trim8Q99PJ2 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trim8Q99PJ2 Gm11978-201ENSMUST00000122315 466 ntBASIC12.52□□□□□ -0.41
Trim8Q99PJ2 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim8Q99PJ2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trim8Q99PJ2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trim8Q99PJ2 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.52□□□□□ -0.41
Trim8Q99PJ2 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim8Q99PJ2 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim8Q99PJ2 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim8Q99PJ2 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim8Q99PJ2 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim8Q99PJ2 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim8Q99PJ2 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.52□□□□□ -0.41
Trim8Q99PJ2 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim8Q99PJ2 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim8Q99PJ2 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim8Q99PJ2 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim8Q99PJ2 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim8Q99PJ2 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim8Q99PJ2 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim8Q99PJ2 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim8Q99PJ2 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms