Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Thumpd1Q99J36 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Thumpd1Q99J36 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Thumpd1Q99J36 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Thumpd1Q99J36 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Thumpd1Q99J36 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.59
Thumpd1Q99J36 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Thumpd1Q99J36 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Thumpd1Q99J36 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Gm13223-201ENSMUST00000118609 747 ntBASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Gm6458-201ENSMUST00000211573 635 ntBASIC11.38□□□□□ -0.59
Thumpd1Q99J36 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Gm9797-201ENSMUST00000052902 613 ntBASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Thumpd1Q99J36 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms